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IMGVR_UViG_3300025737_000082-3300025737-Ga0208694_10032447
Arc-VirIMGVR_UViG_3300025737_000082-3300025737-Ga0208694_10032447
Identity
- Kingdom:
- archaea
Quality
67.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 54-119
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1q16B01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 45.0 | 3.48e-01 | 87.9% | 51.2% |
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.57 | 46.0 | 4.45e-01 | 97.0% | 78.1% |
| 2af0A02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.56 | 48.0 | 4.51e-01 | 95.5% | 86.3% |
| 1s4eG02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.55 | 46.0 | 3.57e-01 | 93.9% | 69.3% |
| 4ksaA02 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.55 | 47.0 | 3.76e-01 | 97.0% | 91.2% |
| 5cxdB01 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.54 | 45.0 | 3.77e-01 | 95.5% | 94.2% |
| 2osaA00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.53 | 45.0 | 3.28e-01 | 98.5% | 82.7% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 41.0 | 3.93e-01 | 100.0% | 74.4% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.51 | 44.0 | 4.10e-01 | 98.5% | 84.7% |
| 1o0sA02 | 1.20.1370.30 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › | 0.51 | 46.0 | 3.86e-01 | 100.0% | 66.7% |
| 3zcoA00 | 1.10.10.2450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.50 | 43.0 | 3.54e-01 | 98.5% | 81.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957561 | 6050.1.1.0 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone | 0.77 | 68.0 | 5.87e-01 | 100.0% | 78.1% |
| 3968270 | 3103.1.1.2 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_13 | 0.73 | 65.0 | 5.47e-01 | 100.0% | 62.7% |
| 3385378 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.62 | 49.0 | 3.38e-01 | 89.4% | 27.6% |
| 3517154 | 4156.1.1.4 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C | 0.62 | 52.0 | 4.11e-01 | 95.5% | 86.4% |
| 3840713 | 509.1.1.10 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › HHD_RTEL1 | 0.60 | 41.0 | 3.73e-01 | 71.2% | 80.0% |
| 3366724 | 605.4.1.16 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › NEPRO_N | 0.60 | 43.0 | 3.52e-01 | 93.9% | 40.8% |
| 4024267 | 109.4.1.200 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_14 | 0.57 | 47.0 | 2.80e-01 | 87.9% | 14.2% |
| 3500715 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.57 | 52.0 | 4.88e-01 | 100.0% | 92.5% |
| 3925681 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.57 | 52.0 | 4.65e-01 | 100.0% | 82.2% |
| 3612022 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 48.0 | 3.46e-01 | 90.9% | 38.8% |
| 3525680 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.56 | 51.0 | 4.89e-01 | 100.0% | 94.7% |
| 3396219 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 46.0 | 3.41e-01 | 89.4% | 39.4% |
| 3832938 | 7088.1.1.3 ↗ | alpha arrays › GPI-anchored protein › GPI-anchored protein › GPI-anchored protein › At1g61900 | 0.53 | 40.0 | 3.84e-01 | 100.0% | 68.2% |
| 3435253 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.51 | 32.0 | 3.10e-01 | 95.5% | 54.7% |