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IMGVR_UViG_3300025770_000022-3300025770-Ga0209362_100018360
Arc-VirIMGVR_UViG_3300025770_000022-3300025770-Ga0209362_100018360
Identity
- Kingdom:
- archaea
Quality
90.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-58
Domain cluster:
rep: Salt_Pond_R2_restored_H2O_MG_scaffold_1_prodigal-single.1__X__X__00155__D1-63
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hm2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 45.0 | 3.29e-01 | 87.9% | 77.2% |
| 1y88A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.57 | 38.0 | 2.97e-01 | 79.3% | 32.0% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.57 | 34.0 | 3.20e-01 | 77.6% | 46.6% |
| 3ke2B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 35.0 | 2.93e-01 | 74.1% | 38.5% |
| 1vjfA00 | 3.90.960.10 | Alpha Beta › Alpha-Beta Complex › YbaK protein › YbaK/aminoacyl-tRNA synthetase-associated domain | 0.55 | 38.0 | 2.83e-01 | 74.1% | 86.1% |
| 4f0qA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 45.0 | 3.24e-01 | 100.0% | 90.1% |
| 5c4iE01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.53 | 39.0 | 2.66e-01 | 74.1% | 38.6% |
| 3d3bJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.53 | 36.0 | 3.23e-01 | 79.3% | 48.3% |
| 3eqvA03 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 38.0 | 2.80e-01 | 79.3% | 34.8% |
| 2n6eA00 | 3.40.1530.20 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › Protein of unknown function (DUF1491) | 0.52 | 39.0 | 3.15e-01 | 79.3% | 83.6% |
| 2vugA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.52 | 38.0 | 3.30e-01 | 82.8% | 79.4% |
| 1xe4A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 36.0 | 2.65e-01 | 75.9% | 42.7% |
| 1vhhA00 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.51 | 43.0 | 3.17e-01 | 96.6% | 58.6% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4975913 | 2008.1.1.220 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_10 | 0.54 | 48.0 | 3.79e-01 | 100.0% | 72.5% |
| 4448557 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.54 | 37.0 | 2.43e-01 | 72.4% | 53.2% |
| 3941070 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.54 | 40.0 | 2.58e-01 | 84.5% | 23.7% |
| 3108806 | 304.54.1.1 ↗ | a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like › BMC | 0.53 | 34.0 | 2.93e-01 | 77.6% | 41.8% |
| 4968758 | 2008.1.1.224 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_3 | 0.52 | 38.0 | 3.21e-01 | 79.3% | 47.4% |
| 3873915 | 219.1.1.81 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY-3_4_CD | 0.51 | 42.0 | 2.64e-01 | 93.1% | 65.4% |
| 3236666 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.51 | 39.0 | 2.44e-01 | 82.8% | 84.8% |
| 3782244 | 4099.1.1.10 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 | 0.51 | 34.0 | 2.87e-01 | 74.1% | 41.0% |
| 3212619 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.51 | 40.0 | 2.51e-01 | 89.7% | 82.5% |
| 3786534 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.51 | 37.0 | 2.74e-01 | 82.8% | 29.4% |
| 3727975 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.50 | 44.0 | 3.19e-01 | 100.0% | 70.8% |
| 3213323 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.50 | 43.0 | 2.66e-01 | 96.6% | 83.7% |