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IMGVR_UViG_3300025772_000442-3300025772-Ga0208939_100249418
Arc-VirIMGVR_UViG_3300025772_000442-3300025772-Ga0208939_100249418
Identity
- Kingdom:
- archaea
Quality
68.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-75
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lfuA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.68 | 54.0 | 4.24e-01 | 89.7% | 41.9% |
| 4gzvA00 | 2.40.128.490 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 | 0.66 | 58.0 | 4.40e-01 | 100.0% | 46.0% |
| 4l8hB00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.66 | 52.0 | 4.08e-01 | 93.1% | 40.7% |
| 6yfiB01 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.66 | 47.0 | 3.65e-01 | 84.5% | 33.3% |
| 3v8uA04 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.65 | 56.0 | 4.28e-01 | 100.0% | 53.2% |
| 5tz6B02 | 3.10.129.120 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.64 | 55.0 | 4.13e-01 | 100.0% | 72.1% |
| 6j5cA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.64 | 46.0 | 4.13e-01 | 89.7% | 54.2% |
| 1c8uA02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.64 | 55.0 | 4.46e-01 | 100.0% | 81.7% |
| 2kcdA00 | 3.10.450.250 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor | 0.63 | 51.0 | 4.05e-01 | 89.7% | 49.2% |
| 2qwzA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 54.0 | 4.24e-01 | 100.0% | 82.0% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.63 | 54.0 | 4.04e-01 | 100.0% | 49.0% |
| 3cqnB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 50.0 | 3.66e-01 | 100.0% | 32.9% |
| 5dstA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.61 | 51.0 | 3.76e-01 | 100.0% | 97.2% |
| 2i9wA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 45.0 | 3.27e-01 | 82.8% | 31.2% |
| 6hswA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 50.0 | 3.08e-01 | 100.0% | 37.3% |
| 1g6q102 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.60 | 49.0 | 3.62e-01 | 100.0% | 97.3% |
| 6i8xA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 45.0 | 3.49e-01 | 100.0% | 34.2% |
| 3hxlA02 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 45.0 | 3.98e-01 | 100.0% | 56.7% |
| 2kcjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 44.0 | 3.62e-01 | 89.7% | 44.4% |
| 3pgbA03 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 45.0 | 3.66e-01 | 84.5% | 65.5% |
| 3lmlA03 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 45.0 | 4.07e-01 | 100.0% | 61.2% |
| 2pcsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 48.0 | 3.68e-01 | 100.0% | 44.7% |
| 4qfwA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.57 | 47.0 | 3.17e-01 | 100.0% | 46.0% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 39.0 | 3.84e-01 | 89.7% | 68.3% |
| 2z17A00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.57 | 39.0 | 3.47e-01 | 75.9% | 68.1% |
| 3e29B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 48.0 | 3.78e-01 | 100.0% | 79.9% |
| 4izxA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 49.0 | 3.74e-01 | 100.0% | 65.5% |
| 3a58A01 | 2.30.29.90 | Mainly Beta › Roll › PH-domain like › | 0.56 | 44.0 | 3.31e-01 | 94.8% | 53.4% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.55 | 41.0 | 4.27e-01 | 89.7% | 98.0% |
| 2gf6A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 45.0 | 3.59e-01 | 96.6% | 81.2% |
| 7btxA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.55 | 46.0 | 2.96e-01 | 100.0% | 38.5% |
| 3nwzB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 45.0 | 3.50e-01 | 100.0% | 70.9% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 38.0 | 3.90e-01 | 89.7% | 83.0% |
| 2hboA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 42.0 | 3.48e-01 | 100.0% | 79.7% |
| 3oblA00 | 2.40.128.450 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 43.0 | 3.44e-01 | 100.0% | 43.2% |
| 4h0pA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 42.0 | 3.02e-01 | 100.0% | 27.5% |
| 4emoC00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 40.0 | 3.43e-01 | 98.3% | 57.8% |
| 2gu3A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 41.0 | 4.06e-01 | 94.8% | 93.8% |
| 2e1qC05 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.51 | 39.0 | 3.22e-01 | 89.7% | 52.5% |
| 4r9iA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 37.0 | 3.17e-01 | 81.0% | 58.0% |
| 1dq3A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 37.0 | 3.30e-01 | 79.3% | 74.7% |
| 3pmiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 34.0 | 3.34e-01 | 87.9% | 64.6% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 39.0 | 3.31e-01 | 89.7% | 74.3% |
| 2ckkA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 37.0 | 3.74e-01 | 93.1% | 84.2% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3691111 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.70 | 62.0 | 4.41e-01 | 100.0% | 34.7% |
| 3371113 | 9.23.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 | 0.66 | 56.0 | 4.00e-01 | 100.0% | 31.1% |
| 3805876 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.66 | 48.0 | 2.98e-01 | 82.8% | 14.3% |
| 3181136 | 4099.1.1.4 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O | 0.66 | 55.0 | 4.40e-01 | 100.0% | 73.8% |
| 3680919 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.64 | 50.0 | 4.00e-01 | 84.5% | 61.7% |
| 4506540 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.64 | 54.0 | 4.30e-01 | 100.0% | 90.8% |
| 3654098 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.64 | 57.0 | 3.92e-01 | 100.0% | 30.3% |
| 4014830 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 48.0 | 4.96e-01 | 89.7% | 89.1% |
| 4012933 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.64 | 53.0 | 4.13e-01 | 100.0% | 87.1% |
| 3313814 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.63 | 56.0 | 4.01e-01 | 100.0% | 33.7% |
| 4504407 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.63 | 54.0 | 3.89e-01 | 100.0% | 62.2% |
| 2658868 | 265.1.1.1 ↗ | a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat | 0.62 | 47.0 | 3.63e-01 | 93.1% | 35.8% |
| 4028728 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.62 | 48.0 | 4.88e-01 | 93.1% | 90.9% |
| 4849080 | 5084.1.1.44 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HphA_C | 0.61 | 51.0 | 4.70e-01 | 100.0% | 71.2% |
| 3168944 | 5.1.4.97 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop | 0.60 | 49.0 | 2.96e-01 | 93.1% | 26.0% |
| 4998648 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.58 | 48.0 | 4.11e-01 | 93.1% | 98.9% |
| 5072111 | 325.1.6.9 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PF26482 | 0.58 | 46.0 | 3.45e-01 | 89.7% | 50.3% |
| 4949036 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.58 | 44.0 | 4.61e-01 | 93.1% | 100.0% |
| 5022396 | 3459.1.1.0 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule | 0.58 | 44.0 | 4.06e-01 | 91.4% | 63.7% |
| 1949 | 4081.1.1.1 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › P35 | 0.58 | 43.0 | 2.74e-01 | 81.0% | 57.2% |
| 3257765 | 331.3.1.7 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG | 0.57 | 46.0 | 3.50e-01 | 100.0% | 34.1% |
| 3399368 | 9.14.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › DUF7042 | 0.57 | 47.0 | 3.73e-01 | 100.0% | 52.6% |
| 4014828 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 43.0 | 4.42e-01 | 91.4% | 92.7% |
| 3867284 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.56 | 44.0 | 2.58e-01 | 89.7% | 10.9% |
| 1390080 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.56 | 44.0 | 3.26e-01 | 94.8% | 50.3% |
| 3241890 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 41.0 | 3.56e-01 | 89.7% | 48.0% |
| 3743975 | 331.4.1.4 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › Fungal_KA1 | 0.55 | 45.0 | 3.80e-01 | 100.0% | 59.1% |
| 4951886 | 3174.4.1.0 ↗ | beta barrels › Ribosomal protein L14-like › Hypothetical protein NegoA.19184.a N-terminal domain › Hypothetical protein NegoA.19184.a N-terminal domain | 0.55 | 47.0 | 4.14e-01 | 98.3% | 72.2% |
| 3224340 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.55 | 46.0 | 3.16e-01 | 100.0% | 72.7% |
| 4995993 | 325.1.6.9 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PF26482 | 0.55 | 42.0 | 3.44e-01 | 89.7% | 63.2% |
| 3481698 | 708.1.2.3 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › Yippee-Mis18 | 0.55 | 42.0 | 3.44e-01 | 87.9% | 44.2% |
| 3266046 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.55 | 42.0 | 4.20e-01 | 91.4% | 86.7% |
| 3236876 | 1.1.5.49 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 | 0.54 | 46.0 | 3.04e-01 | 100.0% | 81.6% |
| 3939443 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.54 | 44.0 | 3.72e-01 | 100.0% | 58.2% |
| 3526482 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.53 | 42.0 | 3.68e-01 | 98.3% | 64.8% |
| 3180573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 43.0 | 3.79e-01 | 96.6% | 76.8% |
| 3795297 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 41.0 | 3.46e-01 | 91.4% | 50.0% |
| 3258452 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.53 | 36.0 | 2.97e-01 | 77.6% | 35.0% |
| 3709162 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 40.0 | 2.59e-01 | 89.7% | 23.6% |
| 3456597 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.52 | 42.0 | 3.18e-01 | 100.0% | 33.3% |
| 3719195 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 43.0 | 2.72e-01 | 96.6% | 20.1% |
| 3932484 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 42.0 | 4.14e-01 | 96.6% | 87.5% |
| 3917310 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.52 | 38.0 | 3.68e-01 | 96.6% | 70.8% |
| 3395150 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 39.0 | 3.92e-01 | 96.6% | 81.7% |
| 3672825 | 708.1.2.12 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › At4g08330 | 0.51 | 41.0 | 3.19e-01 | 94.8% | 92.0% |
| 3940239 | 3338.2.1.0 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB | 0.51 | 38.0 | 3.33e-01 | 96.6% | 49.0% |
| 1177147 | 220.1.1.41 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sharpin_PH | 0.51 | 40.0 | 3.43e-01 | 98.3% | 57.3% |
| 3700378 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 38.0 | 3.86e-01 | 96.6% | 85.0% |
| 4962710 | 295.1.1.54 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF6360 | 0.51 | 39.0 | 3.56e-01 | 91.4% | 70.6% |
| 5556 | 242.1.1.4 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › Endonuc_subdom | 0.51 | 37.0 | 3.18e-01 | 79.3% | 66.3% |
| 3625263 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 40.0 | 3.46e-01 | 93.1% | 61.0% |
| 3678872 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.50 | 41.0 | 3.82e-01 | 93.1% | 82.7% |
| 3942573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 37.0 | 3.76e-01 | 91.4% | 81.0% |