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IMGVR_UViG_3300025784_000089-3300025784-Ga0209200_100283016
Arc-VirIMGVR_UViG_3300025784_000089-3300025784-Ga0209200_100283016
Identity
- Kingdom:
- archaea
Quality
95.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-120
Domain cluster:
rep: ON615601.1__UTS51982.1__X__00034__D5-121
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v43A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 27.0 | 3.35e-01 | 90.1% | 64.1% |
| 2kzbA00 | 2.60.40.2830 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 43.0 | 4.15e-01 | 98.0% | 66.7% |
| 7ui8A01 | 2.60.40.3930 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 36.0 | 3.61e-01 | 70.3% | 58.8% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 36.0 | 3.32e-01 | 100.0% | 50.0% |
| 6k2lA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 39.0 | 3.80e-01 | 71.3% | 73.9% |
| 4c4aA04 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.55 | 47.0 | 4.16e-01 | 99.0% | 95.7% |
| 3k0yA02 | 2.60.40.2370 | Mainly Beta › Sandwich › Immunoglobulin-like › NigD-like, C-terminal beta sandwich domain | 0.54 | 41.0 | 3.77e-01 | 81.2% | 61.7% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 31.0 | 3.65e-01 | 100.0% | 90.5% |
| 3b5mA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 45.0 | 4.29e-01 | 96.0% | 91.6% |
| 2k4qA00 | 4.10.410.40 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › | 0.52 | 42.0 | 3.75e-01 | 91.1% | 84.0% |
| 3d4eA02 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.52 | 31.0 | 3.44e-01 | 87.1% | 75.6% |
| 2fg9A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 45.0 | 3.94e-01 | 100.0% | 80.5% |
| 1ov3A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 26.0 | 3.32e-01 | 94.1% | 89.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928608 | 3899.1.1.0 ↗ | beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 | 0.89 | 82.0 | 6.84e-01 | 100.0% | 61.0% |
| 4932865 | 3899.1.1.0 ↗ | beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 | 0.84 | 80.0 | 7.00e-01 | 100.0% | 73.6% |
| 5058314 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 41.0 | 4.21e-01 | 71.3% | 69.0% |
| 5016485 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.57 | 49.0 | 4.57e-01 | 94.1% | 100.0% |
| 3683009 | 708.1.1.17 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › PF29201 | 0.56 | 33.0 | 3.39e-01 | 98.0% | 60.0% |
| 5059641 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 39.0 | 3.88e-01 | 85.1% | 69.5% |
| 3908332 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.54 | 25.0 | 2.99e-01 | 96.0% | 61.5% |
| 5052022 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.54 | 48.0 | 4.17e-01 | 100.0% | 90.5% |
| 1108188 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.53 | 45.0 | 4.24e-01 | 95.0% | 96.0% |
| 3280741 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 41.0 | 3.80e-01 | 98.0% | 64.4% |
| 4982173 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 39.0 | 3.83e-01 | 87.1% | 72.2% |
| 4944013 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.50 | 42.0 | 3.76e-01 | 96.0% | 90.3% |