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IMGVR_UViG_3300025787_000065-3300025787-Ga0210047_100215213
Arc-VirIMGVR_UViG_3300025787_000065-3300025787-Ga0210047_100215213
Identity
- Kingdom:
- archaea
Quality
83.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-32
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6usmB01 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.83 | 57.0 | 3.59e-01 | 96.9% | 15.6% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.70 | 59.0 | 4.61e-01 | 93.8% | 82.1% |
| 2jiiA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.69 | 56.0 | 3.41e-01 | 90.6% | 40.5% |
| 5xgbA03 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.68 | 57.0 | 3.35e-01 | 93.8% | 29.7% |
| 4uijA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.66 | 58.0 | 4.03e-01 | 100.0% | 51.9% |
| 1e29A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.62 | 51.0 | 3.47e-01 | 96.9% | 67.4% |
| 1hdiA01 | 3.40.50.1260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain | 0.61 | 49.0 | 3.08e-01 | 96.9% | 49.2% |
| 1fznD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 49.0 | 3.44e-01 | 100.0% | 51.7% |
| 4yy8B01 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.57 | 42.0 | 3.23e-01 | 81.2% | 39.7% |
| 3zg9A00 | 6.20.370.110 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.56 | 40.0 | 3.72e-01 | 81.2% | 61.0% |
| 6zhhA01 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.54 | 39.0 | 2.56e-01 | 93.8% | 15.6% |
| 1bq5A02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.52 | 36.0 | 2.43e-01 | 90.6% | 15.6% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3411883 | 604.1.1.63 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SESTD1 | 0.81 | 57.0 | 3.77e-01 | 93.8% | 20.0% |
| 3199044 | 5001.1.1.88 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › STE2 | 0.80 | 56.0 | 3.24e-01 | 75.0% | 8.6% |
| 4028881 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.79 | 55.0 | 3.15e-01 | 75.0% | 7.9% |
| 4998596 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.78 | 56.0 | 3.18e-01 | 75.0% | 9.4% |
| 4999722 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.73 | 62.0 | 4.32e-01 | 93.8% | 37.9% |
| 4025072 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.72 | 57.0 | 3.82e-01 | 87.5% | 26.1% |
| 3415404 | 3343.1.1.2 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal | 0.71 | 60.0 | 3.28e-01 | 100.0% | 18.9% |
| 3622196 | 604.1.1.63 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SESTD1 | 0.70 | 60.0 | 4.06e-01 | 100.0% | 85.0% |
| 3220832 | 592.7.1.1 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 | 0.68 | 51.0 | 3.75e-01 | 84.4% | 33.3% |
| 5048633 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.68 | 57.0 | 3.64e-01 | 96.9% | 44.4% |
| 3998053 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.67 | 55.0 | 4.14e-01 | 90.6% | 73.3% |
| 3196146 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 56.0 | 3.68e-01 | 100.0% | 66.2% |
| 4981250 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.62 | 45.0 | 3.32e-01 | 78.1% | 38.9% |
| 4105287 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 47.0 | 3.88e-01 | 87.5% | 49.1% |
| 3941521 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.61 | 53.0 | 3.61e-01 | 96.9% | 43.4% |
| 2560565 | 6041.1.1.0 ↗ | a+b two layers › DUF1107-like › DUF1107-like › DUF1107-like | 0.59 | 54.0 | 3.64e-01 | 100.0% | 45.4% |
| 3514894 | 386.1.1.337 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › CCDC174_GRSR | 0.58 | 41.0 | 4.27e-01 | 78.1% | 93.3% |
| 4028631 | 226.1.1.4 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB_2 | 0.56 | 43.0 | 3.48e-01 | 87.5% | 61.5% |
| 3936668 | 226.1.1.4 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB_2 | 0.51 | 40.0 | 3.24e-01 | 100.0% | 42.7% |