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IMGVR_UViG_3300025820_000007-3300025820-Ga0209614_100065735

Arc-Vir

IMGVR_UViG_3300025820_000007-3300025820-Ga0209614_100065735

Quality

75.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 42-88_140-181_262-292
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ehfD01 1.20.5.1930 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.57 25.0 3.28e-01 80.8% 73.0%
2ktmA00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.52 28.0 3.39e-01 78.3% 85.3%
1zbsA03 1.10.720.160 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.52 30.0 3.37e-01 86.7% 75.3%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4938700 101.1.2.940 alpha arrays › HTH › HTH › winged helix domain › PF26383 0.51 36.0 2.95e-01 71.7% 75.9%
D2 medium residues 182-261
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 32.0 3.56e-01 92.5% 62.9%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.53 32.0 3.53e-01 93.8% 79.3%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 35.0 3.87e-01 96.2% 88.9%
2budA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 32.0 3.11e-01 92.5% 54.3%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5058926 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.56 35.0 3.67e-01 92.5% 68.0%
4862202 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.55 31.0 3.67e-01 95.0% 89.8%
5036185 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 39.0 4.45e-01 77.5% 100.0%
5057367 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.52 32.0 3.59e-01 91.3% 81.7%
3959053 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.52 33.0 2.56e-01 87.5% 27.6%
D3 medium residues 550-709
PDB