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IMGVR_UViG_3300025820_000007-3300025820-Ga0209614_100065735
Arc-VirIMGVR_UViG_3300025820_000007-3300025820-Ga0209614_100065735
Identity
- Kingdom:
- archaea
Quality
75.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 42-88_140-181_262-292
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ehfD01 | 1.20.5.1930 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.57 | 25.0 | 3.28e-01 | 80.8% | 73.0% |
| 2ktmA00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.52 | 28.0 | 3.39e-01 | 78.3% | 85.3% |
| 1zbsA03 | 1.10.720.160 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.52 | 30.0 | 3.37e-01 | 86.7% | 75.3% |
D2
medium
residues 182-261
Domain cluster:
rep: IMGVR_UViG_3300036942_000191-3300036942-Ga0377186_004296_7672_8994__D50-61_195-282
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bzyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 32.0 | 3.56e-01 | 92.5% | 62.9% |
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 32.0 | 3.53e-01 | 93.8% | 79.3% |
| 4cc2A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 35.0 | 3.87e-01 | 96.2% | 88.9% |
| 2budA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 32.0 | 3.11e-01 | 92.5% | 54.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5058926 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.56 | 35.0 | 3.67e-01 | 92.5% | 68.0% |
| 4862202 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.55 | 31.0 | 3.67e-01 | 95.0% | 89.8% |
| 5036185 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 39.0 | 4.45e-01 | 77.5% | 100.0% |
| 5057367 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.52 | 32.0 | 3.59e-01 | 91.3% | 81.7% |
| 3959053 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 33.0 | 2.56e-01 | 87.5% | 27.6% |
D3
medium
residues 550-709
Domain cluster:
rep: FN436268.1__CBA17767.1__AHIS1_p055__00055__D102-271