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IMGVR_UViG_3300025831_000403-3300025831-Ga0210015_10000175
Arc-VirIMGVR_UViG_3300025831_000403-3300025831-Ga0210015_10000175
Identity
- Kingdom:
- archaea
Quality
73.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 69-203
Domain cluster:
rep: IMGVR_UViG_3300025458_000424-3300025458-Ga0209559_100090112__D25-130
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00565.24 best | SNase | 49.7 | 6.30e-13 | 80.7% | 99.1% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bdlA03 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.89 | 71.0 | 7.39e-01 | 88.1% | 88.8% |
| 4qmgA02 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.88 | 81.0 | 7.94e-01 | 99.3% | 89.6% |
| 2wacA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.88 | 75.0 | 7.83e-01 | 99.3% | 96.0% |
| 1a2tA00 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.87 | 81.0 | 8.17e-01 | 96.3% | 97.0% |
| 3bdlA02 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.85 | 78.0 | 7.43e-01 | 95.6% | 85.1% |
| 4qmgC01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.85 | 81.0 | 7.60e-01 | 100.0% | 89.3% |
| 4b9wA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.85 | 58.0 | 6.50e-01 | 71.1% | 87.0% |
| 3bdlA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.84 | 80.0 | 7.33e-01 | 99.3% | 94.0% |
| 1cukA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 33.0 | 4.60e-01 | 78.5% | 92.4% |
| 3go5A01 | 2.40.50.330 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 31.0 | 4.12e-01 | 79.3% | 78.9% |
| 1bvsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 32.0 | 4.45e-01 | 78.5% | 92.3% |
| 1uwvA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 33.0 | 4.33e-01 | 94.8% | 95.9% |
| 2eqsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 35.0 | 4.17e-01 | 81.5% | 88.8% |
| 2jmcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 26.0 | 3.40e-01 | 78.5% | 81.8% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 27.0 | 3.27e-01 | 90.4% | 73.6% |
| 2p92A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.50 | 30.0 | 3.41e-01 | 81.5% | 81.1% |
ECOD (78)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5066799 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.95 | 66.0 | 7.46e-01 | 71.1% | 100.0% |
| 3385491 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.93 | 81.0 | 7.54e-01 | 100.0% | 75.0% |
| 4954340 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.92 | 69.0 | 7.35e-01 | 83.7% | 85.8% |
| 5054098 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.92 | 79.0 | 8.25e-01 | 95.6% | 95.2% |
| 4033114 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.91 | 84.0 | 8.57e-01 | 95.6% | 98.5% |
| 3965688 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.90 | 84.0 | 8.43e-01 | 100.0% | 96.3% |
| 3642215 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.90 | 80.0 | 7.41e-01 | 97.8% | 75.8% |
| 3261189 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.89 | 80.0 | 7.37e-01 | 97.8% | 76.4% |
| 3599041 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.88 | 84.0 | 8.18e-01 | 98.5% | 99.3% |
| 4218429 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.88 | 85.0 | 7.18e-01 | 100.0% | 84.4% |
| 3602417 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.88 | 84.0 | 7.80e-01 | 97.8% | 93.8% |
| 3337007 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.88 | 84.0 | 7.33e-01 | 99.3% | 81.6% |
| 3609631 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.88 | 85.0 | 8.16e-01 | 100.0% | 97.3% |
| 3930254 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.88 | 84.0 | 7.96e-01 | 99.3% | 94.8% |
| 3194464 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.88 | 82.0 | 7.57e-01 | 97.0% | 84.8% |
| 4673831 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.88 | 84.0 | 7.68e-01 | 100.0% | 89.4% |
| 3971135 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.88 | 82.0 | 8.24e-01 | 97.0% | 99.3% |
| 3730357 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.87 | 83.0 | 8.22e-01 | 98.5% | 97.1% |
| 4525451 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.87 | 84.0 | 6.92e-01 | 100.0% | 75.9% |
| 3634014 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.87 | 81.0 | 8.03e-01 | 96.3% | 97.1% |
| 3561627 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.87 | 59.0 | 6.71e-01 | 82.2% | 88.6% |
| 3261195 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.87 | 84.0 | 7.83e-01 | 100.0% | 93.8% |
| 4589357 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.87 | 84.0 | 7.84e-01 | 100.0% | 84.4% |
| 3609625 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.87 | 84.0 | 7.42e-01 | 99.3% | 74.4% |
| 4023463 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.87 | 83.0 | 7.93e-01 | 98.5% | 91.3% |
| 4026270 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.87 | 82.0 | 7.60e-01 | 98.5% | 92.1% |
| 3596658 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.87 | 83.0 | 7.42e-01 | 99.3% | 76.0% |
| 3785401 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.87 | 79.0 | 7.36e-01 | 97.8% | 80.0% |
| 4022903 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 81.0 | 7.56e-01 | 97.0% | 81.9% |
| 3737542 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.86 | 81.0 | 7.98e-01 | 99.3% | 92.3% |
| 3713169 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 83.0 | 7.35e-01 | 100.0% | 74.4% |
| 4030587 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 80.0 | 7.38e-01 | 96.3% | 81.2% |
| 3611847 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 75.0 | 6.94e-01 | 94.8% | 73.9% |
| 3609624 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 78.0 | 7.64e-01 | 100.0% | 88.3% |
| 3949229 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 82.0 | 7.98e-01 | 100.0% | 91.7% |
| 4026268 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 80.0 | 7.25e-01 | 96.3% | 82.4% |
| 3785402 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 82.0 | 7.68e-01 | 100.0% | 89.4% |
| 4928964 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 68.0 | 7.44e-01 | 85.2% | 96.5% |
| 4180654 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 82.0 | 7.94e-01 | 100.0% | 91.7% |
| 3485853 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 82.0 | 7.29e-01 | 100.0% | 78.3% |
| 3596659 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.85 | 77.0 | 7.21e-01 | 97.8% | 79.4% |
| 3565765 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.85 | 60.0 | 5.94e-01 | 80.0% | 69.3% |
| 3621734 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.85 | 59.0 | 6.30e-01 | 71.1% | 82.5% |
| 3372897 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 79.0 | 7.59e-01 | 97.0% | 92.0% |
| 3277340 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 81.0 | 7.57e-01 | 100.0% | 86.9% |
| 4929215 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.85 | 69.0 | 7.29e-01 | 87.4% | 94.2% |
| 152457 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 81.0 | 7.81e-01 | 100.0% | 90.6% |
| 3558931 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 80.0 | 7.53e-01 | 100.0% | 93.8% |
| 3201480 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 80.0 | 7.78e-01 | 99.3% | 92.4% |
| 3504269 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.84 | 58.0 | 6.43e-01 | 70.4% | 89.1% |
| 3397365 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.84 | 59.0 | 6.37e-01 | 71.9% | 83.5% |
| 3997935 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.84 | 56.0 | 6.41e-01 | 70.4% | 87.6% |
| 3577387 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.84 | 58.0 | 6.31e-01 | 70.4% | 93.9% |
| 3807059 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 81.0 | 7.10e-01 | 100.0% | 97.8% |
| 3883142 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.84 | 59.0 | 6.68e-01 | 75.6% | 92.4% |
| 3245258 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.84 | 60.0 | 6.26e-01 | 73.3% | 84.0% |
| 3485871 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.83 | 72.0 | 7.13e-01 | 89.6% | 97.9% |
| 3195528 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.83 | 79.0 | 7.83e-01 | 99.3% | 95.7% |
| 3921697 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.83 | 59.0 | 6.57e-01 | 83.0% | 89.1% |
| 3615202 | 2.6.1.2 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › RIF5_SNase_2 | 0.83 | 74.0 | 7.10e-01 | 92.6% | 98.0% |
| 4510334 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.83 | 73.0 | 7.57e-01 | 95.6% | 98.4% |
| 3785399 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.82 | 77.0 | 7.41e-01 | 99.3% | 88.0% |
| 3840646 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.82 | 58.0 | 6.27e-01 | 83.0% | 84.3% |
| 3393302 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.82 | 58.0 | 6.45e-01 | 72.6% | 90.0% |
| 3411297 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.82 | 59.0 | 6.66e-01 | 87.4% | 94.3% |
| 3797164 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.82 | 56.0 | 6.12e-01 | 85.2% | 82.6% |
| 3856429 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.82 | 59.0 | 6.28e-01 | 84.4% | 83.3% |
| 3844246 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.81 | 60.0 | 6.46e-01 | 77.8% | 87.8% |
| 3410967 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.81 | 52.0 | 6.17e-01 | 91.1% | 91.6% |
| 3562148 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.81 | 60.0 | 6.36e-01 | 84.4% | 85.0% |
| 3877939 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.81 | 60.0 | 6.39e-01 | 83.0% | 85.8% |
| 3770846 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.80 | 76.0 | 6.98e-01 | 100.0% | 85.3% |
| 4935079 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.77 | 64.0 | 6.61e-01 | 85.2% | 96.2% |
| 3856441 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.77 | 54.0 | 5.80e-01 | 76.3% | 81.7% |
| 4075688 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.76 | 61.0 | 4.85e-01 | 91.1% | 45.3% |
| 3628656 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.76 | 53.0 | 5.69e-01 | 70.4% | 88.7% |
| 3519120 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.73 | 59.0 | 6.12e-01 | 85.9% | 90.4% |
| 4046557 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.70 | 33.0 | 4.61e-01 | 78.5% | 92.3% |