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IMGVR_UViG_3300025837_000059-3300025837-Ga0210016_100707513

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300025837_000059-3300025837-Ga0210016_100707513 ↗
Kingdom:: archaea

Quality

85.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-64

PDB

Domain cluster: representative

CATH (21)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1mhnA00	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.66	41.0	4.23e-01	91.9%	66.1%
2diqA01	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.65	40.0	3.45e-01	85.5%	39.0%
4b9wA02	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.63	36.0	3.75e-01	77.4%	58.9%
2hqvA00	3.40.1570.10	Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains	0.63	47.0	3.52e-01	98.4%	30.2%
2e12A00	2.30.30.720	Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247)	0.60	49.0	4.42e-01	100.0%	64.5%
8bddA02	2.70.98.70	Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 ›	0.55	45.0	2.91e-01	98.4%	33.3%
2x5cA01	3.30.70.3590	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.55	40.0	3.67e-01	100.0%	56.0%
3tx8A02	3.30.70.360	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.55	46.0	3.82e-01	100.0%	52.6%
1f89A00	3.60.110.10	Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase	0.55	43.0	2.80e-01	96.8%	19.6%
6lpnA04	3.30.70.2740	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.54	36.0	3.23e-01	100.0%	45.3%
1wxrA03	3.30.160.280	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.54	38.0	3.63e-01	91.9%	61.8%
3u3pA01	2.10.50.10	Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2	0.54	32.0	2.94e-01	75.8%	43.4%
4exrA01	3.10.450.40	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.54	35.0	3.26e-01	100.0%	50.6%
4c1sA00	1.50.10.20	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.53	40.0	2.46e-01	80.6%	16.3%
4xtvB02	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.53	31.0	3.31e-01	77.4%	66.7%
4ok4A02	2.70.98.70	Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 ›	0.53	44.0	2.83e-01	100.0%	33.2%
2vs7A02	3.10.28.10	Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases	0.53	36.0	3.41e-01	100.0%	57.7%
3tvjB02	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.52	42.0	3.65e-01	96.8%	55.1%
1su0B00	3.90.1010.10	Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A ›	0.52	36.0	2.81e-01	71.0%	65.4%
4hudA01	3.30.2000.40	Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser	0.51	44.0	3.11e-01	100.0%	29.5%
4ms4B02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.50	34.0	2.53e-01	91.9%	25.0%

ECOD (23)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4985969	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.69	43.0	4.38e-01	90.3%	65.0%
3816553	4.1.1.306 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N	0.68	45.0	4.74e-01	93.5%	78.2%
4953054	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.67	45.0	4.31e-01	98.4%	58.7%
4973749	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.66	42.0	4.08e-01	91.9%	57.1%
3883165	4.1.1.9 ↗	beta barrels › SH3 › SH3 › SH3 › TUDOR	0.65	40.0	3.46e-01	91.9%	38.0%
5029031	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.65	43.0	4.36e-01	91.9%	70.0%
4980259	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.64	33.0	3.80e-01	75.8%	68.9%
5058894	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.63	35.0	3.94e-01	75.8%	73.3%
3507338	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.63	40.0	4.07e-01	98.4%	66.7%
3547093	4.1.1.9 ↗	beta barrels › SH3 › SH3 › SH3 › TUDOR	0.62	39.0	3.52e-01	91.9%	43.3%
3165551	375.1.1.38 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Topo_Zn_Ribbon	0.61	31.0	3.22e-01	75.8%	48.3%
3768095	4.1.1.9 ↗	beta barrels › SH3 › SH3 › SH3 › TUDOR	0.61	39.0	3.42e-01	91.9%	42.1%
4957561	6050.1.1.0 ↗	a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone	0.60	43.0	3.71e-01	79.0%	65.7%
4952498	4.11.1.1 ↗	beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24	0.58	35.0	3.10e-01	91.9%	36.4%
3911223	389.1.3.1 ↗	few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6	0.56	33.0	2.98e-01	75.8%	42.4%
3615113	4.18.1.1 ↗	beta barrels › SH3 › Plus3 › Plus3 › Plus-3	0.55	45.0	3.45e-01	91.9%	48.7%
3391556	4.1.1.384 ↗	beta barrels › SH3 › SH3 › SH3 › Tudor_krimper_1st	0.55	48.0	4.07e-01	98.4%	61.9%
4936151	881.1.1.0 ↗	a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like	0.54	44.0	3.39e-01	95.2%	53.8%
3884016	389.1.3.0 ↗	few secondary structure elements › EGF-like › EGF-related › TNF receptor-like	0.54	32.0	3.25e-01	75.8%	60.0%
4951973	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.53	30.0	3.19e-01	77.4%	58.2%
4951495	375.1.1.299 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf	0.53	29.0	3.26e-01	72.6%	72.5%
3535180	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.53	44.0	3.46e-01	98.4%	43.7%
4959983	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.52	30.0	3.16e-01	77.4%	58.2%