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IMGVR_UViG_3300025850_000204-3300025850-Ga0210050_10050421
Arc-VirIMGVR_UViG_3300025850_000204-3300025850-Ga0210050_10050421
Identity
- Kingdom:
- archaea
Quality
68.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-76
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.84 | 64.0 | 6.96e-01 | 82.3% | 96.2% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.76 | 65.0 | 5.76e-01 | 96.8% | 83.5% |
| 1t33A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.74 | 63.0 | 4.71e-01 | 96.8% | 75.3% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.72 | 54.0 | 5.09e-01 | 80.6% | 83.8% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.69 | 51.0 | 5.15e-01 | 79.0% | 85.2% |
| 4k08A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.68 | 50.0 | 3.83e-01 | 79.0% | 34.7% |
| 3uarA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.67 | 45.0 | 3.78e-01 | 71.0% | 48.6% |
| 3anwA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 50.0 | 4.03e-01 | 83.9% | 43.4% |
| 1vmgA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.66 | 45.0 | 4.08e-01 | 71.0% | 56.1% |
| 1t90A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.65 | 51.0 | 3.29e-01 | 83.9% | 19.3% |
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 47.0 | 4.43e-01 | 75.8% | 64.9% |
| 6ygiB01 | 1.10.4090.10 | Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus | 0.65 | 54.0 | 4.07e-01 | 90.3% | 66.4% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 47.0 | 3.76e-01 | 75.8% | 67.5% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.65 | 49.0 | 4.95e-01 | 82.3% | 79.0% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.65 | 50.0 | 4.80e-01 | 82.3% | 83.1% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.64 | 42.0 | 4.38e-01 | 72.6% | 75.4% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 49.0 | 4.70e-01 | 80.6% | 100.0% |
| 2b1eA01 | 1.20.58.1150 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 50.0 | 4.39e-01 | 82.3% | 60.5% |
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.64 | 44.0 | 4.55e-01 | 80.6% | 76.3% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.63 | 48.0 | 4.43e-01 | 82.3% | 63.3% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 47.0 | 4.49e-01 | 80.6% | 69.9% |
| 2p4vA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.62 | 43.0 | 4.03e-01 | 72.6% | 60.5% |
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.62 | 44.0 | 4.13e-01 | 93.5% | 60.8% |
| 1gcbA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 50.0 | 3.12e-01 | 95.2% | 29.8% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.61 | 43.0 | 4.11e-01 | 75.8% | 80.0% |
| 1z9hA03 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 42.0 | 3.25e-01 | 75.8% | 35.1% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.59 | 41.0 | 4.59e-01 | 85.5% | 91.8% |
| 2cdqA02 | 1.20.120.1320 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain | 0.59 | 49.0 | 4.30e-01 | 100.0% | 61.9% |
| 2rklF00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.58 | 42.0 | 4.53e-01 | 75.8% | 90.4% |
| 2l35A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.58 | 46.0 | 4.59e-01 | 87.1% | 84.1% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 43.0 | 4.32e-01 | 87.1% | 93.5% |
| 2lrmA00 | 1.10.890.30 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein | 0.55 | 40.0 | 3.62e-01 | 77.4% | 70.2% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 43.0 | 4.30e-01 | 93.5% | 84.6% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.51 | 41.0 | 3.82e-01 | 96.8% | 75.9% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1877692 | 6026.1.1.1 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › cwf21 | 0.88 | 64.0 | 7.13e-01 | 75.8% | 97.9% |
| 4011398 | 633.24.1.0 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain | 0.88 | 70.0 | 6.24e-01 | 87.1% | 62.4% |
| 4003051 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.85 | 64.0 | 6.32e-01 | 79.0% | 95.4% |
| 3997160 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.80 | 71.0 | 6.06e-01 | 100.0% | 70.0% |
| 185993 | 6026.1.1.1 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › cwf21 | 0.79 | 64.0 | 6.53e-01 | 87.1% | 90.2% |
| 4324592 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.78 | 63.0 | 5.35e-01 | 87.1% | 56.0% |
| 3617842 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.77 | 60.0 | 5.50e-01 | 85.5% | 65.0% |
| 3414817 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.77 | 65.0 | 4.11e-01 | 96.8% | 19.7% |
| 3438464 | 5063.1.1.0 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK | 0.75 | 56.0 | 6.06e-01 | 80.6% | 98.0% |
| 3807205 | 109.4.1.1264 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16 | 0.74 | 59.0 | 4.16e-01 | 87.1% | 28.9% |
| 3824761 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.71 | 59.0 | 5.72e-01 | 93.5% | 81.4% |
| 4663861 | 5069.1.3.78 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › MIS13 | 0.71 | 59.0 | 5.43e-01 | 93.5% | 82.5% |
| 4784164 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.71 | 51.0 | 4.93e-01 | 75.8% | 85.7% |
| 4935068 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.69 | 54.0 | 5.03e-01 | 82.3% | 74.7% |
| 4939264 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.67 | 54.0 | 5.19e-01 | 85.5% | 90.0% |
| 3399070 | 4082.1.1.1 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain › Hairy_orange | 0.67 | 47.0 | 5.03e-01 | 77.4% | 83.6% |
| 3775753 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 53.0 | 3.06e-01 | 93.5% | 8.5% |
| 5078584 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.66 | 51.0 | 4.31e-01 | 82.3% | 62.0% |
| 3677033 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 54.0 | 3.68e-01 | 91.9% | 27.4% |
| 4030488 | 3291.1.1.91 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › LUC7 | 0.65 | 49.0 | 4.72e-01 | 80.6% | 70.0% |
| 3552520 | 241.15.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 | 0.65 | 52.0 | 5.14e-01 | 88.7% | 86.2% |
| 3188573 | 5010.1.1.0 ↗ | extended segments › Bacterial aa3 type cytochrome c oxidase subunit IV › Bacterial aa3 type cytochrome c oxidase subunit IV › Bacterial aa3 type cytochrome c oxidase subunit IV | 0.64 | 46.0 | 4.71e-01 | 75.8% | 81.7% |
| 4511884 | 4082.1.1.1 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain › Hairy_orange | 0.64 | 42.0 | 4.79e-01 | 71.0% | 95.6% |
| 3655235 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.62 | 44.0 | 3.45e-01 | 77.4% | 53.8% |
| 3664076 | 148.1.1.1 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone | 0.58 | 46.0 | 3.77e-01 | 85.5% | 50.0% |
| 4826095 | 5067.1.1.5 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Sterol-sensing | 0.57 | 44.0 | 3.99e-01 | 88.7% | 61.3% |
| 4025391 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.57 | 51.0 | 4.60e-01 | 100.0% | 87.1% |
| 3535346 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.57 | 47.0 | 2.88e-01 | 96.8% | 32.8% |
| 4029516 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.55 | 47.0 | 3.33e-01 | 100.0% | 32.2% |