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IMGVR_UViG_3300025877_000037-3300025877-Ga0208460_100010827
Arc-VirIMGVR_UViG_3300025877_000037-3300025877-Ga0208460_100010827
Identity
- Kingdom:
- archaea
Quality
83.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 18-71
Domain cluster:
rep: OM654377.1__UNY40393.1__KLEP7_gp25__00025__D2-51
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nqhA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.70 | 48.0 | 3.57e-01 | 72.2% | 36.8% |
| 3fsyB01 | 3.30.70.2010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 52.0 | 4.13e-01 | 85.2% | 69.4% |
| 1oj5A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.66 | 44.0 | 3.53e-01 | 70.4% | 96.2% |
| 3by9B01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.64 | 43.0 | 3.22e-01 | 70.4% | 73.3% |
| 3lyxB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 42.0 | 3.25e-01 | 70.4% | 84.2% |
| 4lrzE01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.62 | 42.0 | 2.91e-01 | 70.4% | 53.4% |
| 3afgA03 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 42.0 | 3.47e-01 | 72.2% | 44.1% |
| 3e4pA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.62 | 42.0 | 3.30e-01 | 70.4% | 89.0% |
| 3mjqA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 41.0 | 3.30e-01 | 70.4% | 91.6% |
| 3cwfA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 41.0 | 3.26e-01 | 70.4% | 60.2% |
| 3gf8A01 | 2.60.40.2100 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 51.0 | 3.72e-01 | 98.1% | 75.3% |
| 2gnxA02 | 3.30.450.240 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.59 | 40.0 | 3.17e-01 | 70.4% | 68.8% |
| 2b02A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 40.0 | 3.23e-01 | 70.4% | 99.0% |
| 5nfiB01 | 2.60.40.2100 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 51.0 | 3.86e-01 | 100.0% | 49.6% |
| 2yocA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 48.0 | 3.92e-01 | 94.4% | 69.4% |
| 1skoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.57 | 39.0 | 3.00e-01 | 70.4% | 70.7% |
| 4jd0A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.57 | 42.0 | 2.84e-01 | 85.2% | 73.1% |
| 3govB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 48.0 | 3.70e-01 | 96.3% | 57.7% |
| 4mn5A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 38.0 | 3.09e-01 | 70.4% | 86.4% |
| 5dj7A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 45.0 | 3.70e-01 | 94.4% | 50.9% |
| 1cidA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 3.85e-01 | 94.4% | 64.8% |
| 3m1cA04 | 2.60.40.3190 | Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain | 0.54 | 44.0 | 3.34e-01 | 92.6% | 44.7% |
| 4zzfA02 | 2.60.40.4070 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 46.0 | 3.74e-01 | 94.4% | 68.8% |
| 1k42A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 36.0 | 2.60e-01 | 72.2% | 29.8% |
| 3rj2X00 | 2.60.120.1150 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 46.0 | 3.48e-01 | 100.0% | 57.9% |
| 2x5pA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 3.49e-01 | 92.6% | 47.1% |
| 5icuA00 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 44.0 | 3.56e-01 | 92.6% | 55.9% |
| 3payC01 | 2.60.40.2100 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 40.0 | 3.00e-01 | 94.4% | 74.7% |
| 6u7jA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.61e-01 | 92.6% | 58.4% |
| 4jklA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.52e-01 | 92.6% | 57.9% |
| 1ut9A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 3.56e-01 | 94.4% | 60.2% |
| 4cj0A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 3.58e-01 | 94.4% | 56.8% |
| 3isyA00 | 2.60.40.2360 | Mainly Beta › Sandwich › Immunoglobulin-like › Intracellular proteinase inhibitor BsuPI | 0.50 | 42.0 | 3.27e-01 | 92.6% | 62.4% |
| 3f1sB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 40.0 | 3.48e-01 | 94.4% | 58.1% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4964967 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.71 | 55.0 | 4.05e-01 | 85.2% | 34.3% |
| 3952771 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.71 | 49.0 | 3.84e-01 | 72.2% | 64.8% |
| 3763290 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.66 | 49.0 | 3.76e-01 | 98.1% | 33.8% |
| 4338610 | 272.1.1.0 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain | 0.63 | 44.0 | 3.82e-01 | 72.2% | 70.9% |
| 5033080 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 43.0 | 3.59e-01 | 70.4% | 56.8% |
| 1034948 | 3518.1.1.1 ↗ | a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind | 0.61 | 50.0 | 3.43e-01 | 92.6% | 79.9% |
| 4927114 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 43.0 | 3.58e-01 | 70.4% | 56.8% |
| 4457666 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.60 | 44.0 | 3.96e-01 | 81.5% | 85.0% |
| 3274214 | 859.1.1.1 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA | 0.60 | 52.0 | 3.50e-01 | 94.4% | 59.9% |
| 3219058 | 10.4.1.39 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_M02D8_5_4th | 0.60 | 40.0 | 3.06e-01 | 70.4% | 32.8% |
| 3282260 | 375.12.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Nicotinate phosphoribosyltransferase C-terminal domain-related › Nicotinate phosphoribosyltransferase C-terminal domain-related | 0.59 | 47.0 | 3.97e-01 | 87.0% | 73.3% |
| 4975534 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.59 | 49.0 | 3.20e-01 | 94.4% | 31.4% |
| None | — | 0.59 | 50.0 | 3.99e-01 | 94.4% | 60.0% | |
| 3596268 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 38.0 | 2.78e-01 | 70.4% | 48.0% |
| 3499355 | 7558.1.1.11 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Acyltransferase,Acyltransf_C | 0.55 | 46.0 | 3.20e-01 | 100.0% | 40.0% |
| 3621110 | 11.1.1.31 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG2 | 0.53 | 46.0 | 3.74e-01 | 96.3% | 56.0% |
| 3620107 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.53 | 35.0 | 2.77e-01 | 72.2% | 65.0% |
| 1292103 | 11.1.1.48 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CelD_N | 0.52 | 43.0 | 3.54e-01 | 92.6% | 53.5% |
| 3588234 | 11.1.4.36 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SpaA | 0.52 | 45.0 | 3.61e-01 | 92.6% | 55.0% |
| 5080295 | 11.1.1.608 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Por_Secre_tail | 0.51 | 41.0 | 3.42e-01 | 96.3% | 57.0% |
| 3566162 | 11.1.1.375 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M,MG2,A2M_BRD | 0.51 | 41.0 | 2.39e-01 | 100.0% | 23.9% |
| 3389642 | 11.1.1.391 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M,MG2,A2M_BRD,MG3 | 0.51 | 42.0 | 2.36e-01 | 96.3% | 9.9% |
| 5075554 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 42.0 | 3.50e-01 | 92.6% | 55.8% |
D2
medium
residues 76-115
Domain cluster:
representative