IMGVR_UViG_3300025894_000178-3300025894-Ga0209335_100047921

Arc-Vir

Identity

78.7 mean pLDDT

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 638-703

PDB

D2 medium residues 3-85

PDB

Domain cluster: representative

D3 medium residues 86-100_158-279_530-587

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5a48B00	3.30.420.610	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like	0.53	19.0	2.65e-01	93.8%	60.4%
6juvB01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.50	18.0	2.87e-01	73.8%	82.7%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3679276	263.1.1.1 ↗	a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF	0.62	17.0	3.00e-01	80.5%	71.4%
3625566	145.1.1.25 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › RPN13_C	0.51	25.0	3.00e-01	87.2%	68.0%

D4 medium residues 101-157

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2uyyA02	1.10.1040.10	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	0.70	60.0	4.61e-01	93.0%	91.1%
2jdiG01	1.10.287.80	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain	0.70	46.0	4.53e-01	94.7%	63.9%
3hr0B01	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.66	57.0	5.09e-01	94.7%	94.9%
4nphA02	1.20.1270.330	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.65	54.0	5.05e-01	96.5%	98.6%
1j1jA02	1.20.58.200	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2	0.64	50.0	4.46e-01	96.5%	58.8%
4o1pD02	1.10.510.10	Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1	0.63	50.0	3.33e-01	89.5%	52.0%
2yf4F00	1.10.3420.10	Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain	0.62	56.0	4.13e-01	100.0%	40.6%
2xbkA00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.59	53.0	3.21e-01	100.0%	39.6%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3689887	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.64	52.0	5.20e-01	93.0%	100.0%
3258187	558.1.1.1 ↗	alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain › LisH	0.63	34.0	3.54e-01	80.7%	52.7%
3801692	604.12.1.5 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › SUV3_C	0.62	48.0	4.09e-01	94.7%	51.6%
3702178	129.1.1.16 ↗	alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_11	0.61	54.0	4.18e-01	100.0%	88.0%
4346887	605.1.1.1 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA	0.58	48.0	4.46e-01	96.5%	80.0%

D5 medium residues 280-394

PDB

Domain cluster: rep: IMGVR_UViG_3300039323_000003-3300039323-Ga0169852_04752_856_1338__D1-111

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2xziA00	2.120.10.10	Mainly Beta › 6 Propeller › Neuraminidase ›	0.51	43.0	2.97e-01	91.3%	69.6%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4020255	243.1.1.26 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4	0.62	45.0	3.55e-01	73.9%	54.9%
1568649	5.1.3.167 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR, BNR_2, BNR_3	0.54	47.0	3.12e-01	95.7%	95.0%
5072529	512.1.1.1 ↗	a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st	0.54	30.0	3.27e-01	72.2%	65.6%
4074364	243.1.1.0 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like	0.53	29.0	2.86e-01	73.9%	45.4%
3204195	12.3.1.19 ↗	beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2	0.51	38.0	2.88e-01	78.3%	72.6%

D6 medium residues 409-477

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7jj9A02	3.40.50.1980	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain	0.59	40.0	3.37e-01	71.0%	90.8%
2pw6A00	3.40.830.10	Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like	0.55	37.0	2.67e-01	72.5%	72.1%
1senA00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.54	39.0	3.23e-01	78.3%	98.5%
3f1sA01	3.30.497.10	Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2	0.53	40.0	2.84e-01	84.1%	39.1%
2ob5A00	3.40.1650.10	Alpha Beta › 3-Layer(aba) Sandwich › RbsD-like fold › RbsD-like domain	0.52	39.0	3.23e-01	87.0%	86.1%
3pzfA02	3.30.497.10	Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2	0.52	39.0	2.94e-01	84.1%	49.2%
4hqsA00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.52	38.0	3.15e-01	81.2%	68.9%
3dmlA00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.50	36.0	3.33e-01	78.3%	70.5%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4257099	2007.1.3.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like	0.56	43.0	3.69e-01	82.6%	58.2%
3274213	2485.1.1.55 ↗	a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FAF1	0.55	40.0	3.14e-01	78.3%	85.2%
4029269	2485.1.1.0 ↗	a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like	0.51	39.0	2.72e-01	87.0%	50.9%
5063485	7512.1.1.6 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20	0.50	37.0	2.78e-01	82.6%	74.0%