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IMGVR_UViG_3300025902_000346-3300025902-Ga0209202_10104864
Arc-VirIMGVR_UViG_3300025902_000346-3300025902-Ga0209202_10104864
Identity
- Kingdom:
- archaea
Quality
71.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-105
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jngA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 49.0 | 5.14e-01 | 77.6% | 98.7% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 45.0 | 4.77e-01 | 70.6% | 91.9% |
| 1ixdA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.64 | 45.0 | 4.25e-01 | 74.1% | 77.9% |
| 1ub4A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 47.0 | 4.44e-01 | 78.8% | 86.4% |
| 2gfuA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 49.0 | 4.27e-01 | 85.9% | 80.6% |
| 5hk0B00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 47.0 | 4.38e-01 | 80.0% | 90.7% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 42.0 | 4.16e-01 | 72.9% | 76.1% |
| 2p84A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.59 | 43.0 | 4.61e-01 | 83.5% | 90.4% |
| 4zgnB00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 41.0 | 3.90e-01 | 72.9% | 71.8% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 41.0 | 4.30e-01 | 72.9% | 94.6% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 39.0 | 3.96e-01 | 70.6% | 83.3% |
| 2qf4A02 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.57 | 38.0 | 3.78e-01 | 70.6% | 64.8% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 38.0 | 4.16e-01 | 70.6% | 97.1% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 39.0 | 4.26e-01 | 71.8% | 100.0% |
| 3pggA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 3.99e-01 | 72.9% | 96.2% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.55 | 38.0 | 3.74e-01 | 70.6% | 77.8% |
| 1ljoA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 4.03e-01 | 72.9% | 93.3% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.54 | 37.0 | 3.55e-01 | 72.9% | 87.5% |
| 1wxrA03 | 3.30.160.280 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 37.0 | 3.94e-01 | 85.9% | 84.2% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 36.0 | 3.15e-01 | 83.5% | 44.5% |
| 1ja1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 39.0 | 3.51e-01 | 81.2% | 93.4% |
| 1wgmA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 33.0 | 3.49e-01 | 71.8% | 74.0% |
| 2h6oA01 | 2.60.40.2800 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 36.0 | 3.12e-01 | 76.5% | 87.9% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3514970 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 64.0 | 6.34e-01 | 95.3% | 88.9% |
| 3936496 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 66.0 | 6.30e-01 | 100.0% | 90.0% |
| 3854862 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.73 | 63.0 | 6.11e-01 | 100.0% | 85.3% |
| 3628131 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.72 | 65.0 | 6.14e-01 | 100.0% | 83.0% |
| 3488114 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 57.0 | 5.07e-01 | 84.7% | 62.5% |
| 3486271 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 62.0 | 6.13e-01 | 96.5% | 92.2% |
| 3393360 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.71 | 61.0 | 5.47e-01 | 96.5% | 68.7% |
| 3399422 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.71 | 59.0 | 5.76e-01 | 98.8% | 82.1% |
| 3500542 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.71 | 62.0 | 6.08e-01 | 96.5% | 93.3% |
| 3791752 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 48.0 | 5.39e-01 | 70.6% | 98.5% |
| 3463181 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 51.0 | 5.55e-01 | 80.0% | 92.9% |
| 4049824 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.70 | 60.0 | 5.48e-01 | 96.5% | 74.8% |
| 3609629 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.69 | 62.0 | 6.01e-01 | 100.0% | 92.6% |
| 3507146 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 61.0 | 6.11e-01 | 100.0% | 98.8% |
| 3629536 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 60.0 | 5.87e-01 | 100.0% | 92.6% |
| 3451171 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 47.0 | 5.28e-01 | 72.9% | 100.0% |
| 1826911 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.66 | 49.0 | 4.93e-01 | 78.8% | 95.4% |
| 3244497 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.65 | 50.0 | 4.11e-01 | 82.4% | 84.7% |
| 3620551 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 44.0 | 3.71e-01 | 71.8% | 74.7% |
| 3730835 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.64 | 44.0 | 4.23e-01 | 70.6% | 71.6% |
| 3449268 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 49.0 | 4.99e-01 | 83.5% | 100.0% |
| 3665882 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.64 | 52.0 | 4.45e-01 | 88.2% | 83.0% |
| 4018213 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.63 | 49.0 | 4.15e-01 | 83.5% | 97.2% |
| 4540843 | 4.1.1.434 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2642 | 0.63 | 42.0 | 4.73e-01 | 71.8% | 90.8% |
| 5001586 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 46.0 | 4.56e-01 | 78.8% | 100.0% |
| 3549474 | 4.1.1.406 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-A_UBE2O | 0.62 | 47.0 | 3.82e-01 | 82.4% | 100.0% |
| 4949489 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.62 | 43.0 | 4.30e-01 | 70.6% | 75.3% |
| 3911348 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 46.0 | 4.06e-01 | 81.2% | 77.7% |
| 4044269 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.61 | 42.0 | 4.56e-01 | 70.6% | 87.1% |
| 3888349 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.61 | 46.0 | 4.02e-01 | 81.2% | 77.7% |
| 5037939 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.60 | 49.0 | 4.08e-01 | 89.4% | 60.0% |
| 5017073 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.60 | 49.0 | 4.15e-01 | 90.6% | 63.3% |
| 3373105 | 4.1.1.309 ↗ | beta barrels › SH3 › SH3 › SH3 › MRP-S34 | 0.60 | 45.0 | 4.60e-01 | 78.8% | 100.0% |
| 5050320 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.60 | 42.0 | 4.49e-01 | 74.1% | 82.7% |
| 5069810 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.60 | 42.0 | 4.33e-01 | 74.1% | 77.5% |
| 4979291 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.60 | 43.0 | 4.54e-01 | 74.1% | 85.3% |
| 4018672 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.59 | 47.0 | 4.32e-01 | 88.2% | 93.0% |
| 3599398 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.59 | 43.0 | 4.12e-01 | 76.5% | 67.0% |
| 4971470 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.57 | 41.0 | 4.34e-01 | 78.8% | 85.3% |
| 4948433 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.57 | 40.0 | 4.44e-01 | 74.1% | 92.6% |
| 3642150 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.56 | 38.0 | 3.73e-01 | 70.6% | 73.7% |
| 5081442 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.56 | 39.0 | 4.22e-01 | 74.1% | 88.6% |
| 5041340 | 270.1.1.1 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Pur_DNA_glyco | 0.56 | 43.0 | 3.38e-01 | 84.7% | 96.8% |
| 3217772 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 40.0 | 4.06e-01 | 78.8% | 82.4% |
| 4125814 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.54 | 42.0 | 4.48e-01 | 84.7% | 100.0% |
| 3600132 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.51 | 39.0 | 2.87e-01 | 83.5% | 85.0% |
| 3273170 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.51 | 38.0 | 3.19e-01 | 81.2% | 97.5% |
| 4866124 | 11.1.1.73 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Herpes_gp350_A | 0.51 | 38.0 | 3.17e-01 | 81.2% | 85.3% |
| 4883586 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 36.0 | 3.68e-01 | 78.8% | 93.0% |