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IMGVR_UViG_3300025902_000346-3300025902-Ga0209202_10104865
Arc-VirIMGVR_UViG_3300025902_000346-3300025902-Ga0209202_10104865
Identity
- Kingdom:
- archaea
Quality
86.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-70
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xp1A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 37.0 | 3.30e-01 | 72.7% | 81.1% |
| 2ci9B00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 36.0 | 3.22e-01 | 72.7% | 70.0% |
| 4qa8A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.52 | 42.0 | 3.07e-01 | 93.9% | 81.9% |
| 3e5zA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 43.0 | 2.87e-01 | 95.5% | 37.6% |
| 1xkiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 42.0 | 3.50e-01 | 95.5% | 73.4% |
| 1kqfB01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 39.0 | 3.56e-01 | 81.8% | 93.3% |
| 2d9vA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 34.0 | 3.05e-01 | 71.2% | 50.0% |
| 3nbcA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 40.0 | 3.22e-01 | 92.4% | 98.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031064 | 4999.1.1.0 ↗ | beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like | 0.58 | 35.0 | 3.78e-01 | 95.5% | 72.7% |
| 3191174 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 40.0 | 2.53e-01 | 83.3% | 96.8% |
| 3620802 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.51 | 42.0 | 3.58e-01 | 95.5% | 80.5% |
| None | — | 0.51 | 44.0 | 2.83e-01 | 100.0% | 46.6% | |
| 3179666 | 10.1.1.73 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF26113 | 0.51 | 36.0 | 2.49e-01 | 75.8% | 81.1% |
| 3923745 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.51 | 40.0 | 3.29e-01 | 87.9% | 50.4% |
| 4950397 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 30.0 | 3.31e-01 | 98.5% | 72.7% |
| 3412178 | 4184.1.1.1 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 | 0.50 | 34.0 | 3.38e-01 | 74.2% | 68.1% |