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IMGVR_UViG_3300026074_000011-3300026074-Ga0208747_10036255

Arc-Vir

IMGVR_UViG_3300026074_000011-3300026074-Ga0208747_10036255

Quality

82.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-90
PDB
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k6oA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.76 64.0 6.73e-01 100.0% 100.0%
1quqB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 58.0 5.19e-01 100.0% 57.9%
2pi2D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 61.0 5.26e-01 100.0% 56.9%
4gnxB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 62.0 5.34e-01 100.0% 58.2%
1iyjB04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 67.0 5.55e-01 98.8% 57.2%
1jb7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 68.0 5.96e-01 100.0% 74.1%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.73 50.0 5.43e-01 70.4% 89.6%
1wydA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 65.0 6.06e-01 100.0% 79.4%
3i7fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 64.0 5.52e-01 100.0% 70.3%
3tssA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 58.0 6.18e-01 91.4% 100.0%
4glaC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 64.0 6.26e-01 100.0% 94.4%
4me3A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 64.0 6.02e-01 100.0% 86.6%
5jpnC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 63.0 5.08e-01 100.0% 58.0%
3u4zA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 64.0 5.77e-01 100.0% 77.1%
4l5tB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 59.0 5.73e-01 100.0% 84.6%
3kf6A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 62.0 5.21e-01 100.0% 58.8%
1xweA01 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 62.0 5.14e-01 100.0% 66.4%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 62.0 5.16e-01 100.0% 59.6%
3rn5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 59.0 5.70e-01 100.0% 84.8%
1bbuA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 61.0 5.12e-01 100.0% 59.3%
1xjvA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 61.0 5.07e-01 100.0% 61.3%
4hikA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 61.0 5.11e-01 100.0% 80.4%
1eovA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 60.0 5.14e-01 100.0% 70.1%
4l5rC02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 55.0 5.39e-01 95.1% 83.1%
3iayA01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 59.0 5.59e-01 100.0% 91.8%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 56.0 5.62e-01 97.5% 96.3%
4twlA00 3.10.200.10 Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase 0.64 53.0 3.85e-01 93.8% 63.2%
1je5A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 54.0 4.28e-01 100.0% 92.8%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 35.0 3.02e-01 96.3% 35.0%
1b7yB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 54.0 4.81e-01 98.8% 81.0%
6lbtA01 2.40.50.810 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 52.0 4.38e-01 97.5% 73.2%
4xfwA00 3.10.200.10 Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase 0.61 52.0 3.79e-01 95.1% 82.3%
3rr1A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 41.0 3.50e-01 71.6% 81.8%
3q31A00 3.10.200.10 Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase 0.60 50.0 3.58e-01 91.4% 64.8%
1ebdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 34.0 3.03e-01 97.5% 37.2%
4bwgD00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 46.0 4.45e-01 91.4% 90.7%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 49.0 4.55e-01 98.8% 84.9%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 31.0 2.80e-01 98.8% 36.1%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.51 38.0 4.00e-01 96.3% 92.9%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4052370 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.80 61.0 6.68e-01 98.8% 100.0%
5070441 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.79 57.0 6.08e-01 92.6% 87.1%
4677730 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.78 58.0 6.34e-01 95.1% 98.4%
4205168 2.1.1.38 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.78 58.0 6.40e-01 98.8% 98.5%
4983389 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.77 53.0 5.85e-01 70.4% 92.3%
4103327 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.77 53.0 4.53e-01 70.4% 75.6%
4443040 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.77 52.0 4.78e-01 70.4% 82.7%
3948546 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.76 52.0 4.82e-01 70.4% 83.0%
3969569 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.76 49.0 5.60e-01 91.4% 88.3%
4942400 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 61.0 5.25e-01 96.3% 56.0%
4341423 2.1.1.279 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF4131 0.75 68.0 5.95e-01 100.0% 82.5%
4211209 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.75 48.0 5.36e-01 91.4% 81.5%
5083957 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 62.0 6.12e-01 100.0% 84.7%
5029056 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.75 63.0 5.56e-01 100.0% 64.3%
3826195 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.74 68.0 6.32e-01 100.0% 82.0%
3729167 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 66.0 6.16e-01 98.8% 100.0%
4281449 2.4.1.3 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.74 50.0 4.29e-01 70.4% 57.0%
3236144 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 66.0 5.98e-01 100.0% 82.7%
3501852 2.1.1.47 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › BRCA-2_OB3 0.73 67.0 5.94e-01 100.0% 87.0%
4446834 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.73 50.0 4.45e-01 70.4% 73.5%
4028808 2.1.1.142 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB 0.73 67.0 5.29e-01 100.0% 51.2%
4594302 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.73 54.0 4.77e-01 77.8% 91.3%
4417109 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.73 50.0 4.55e-01 70.4% 77.1%
4026991 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 66.0 5.56e-01 100.0% 80.6%
3389015 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 62.0 5.81e-01 93.8% 76.0%
3346797 2.1.1.71 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TTC5_OB 0.73 66.0 5.50e-01 100.0% 64.3%
4315677 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 58.0 5.92e-01 100.0% 87.5%
4165211 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.73 50.0 4.06e-01 70.4% 67.6%
4311691 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.73 55.0 4.61e-01 80.2% 77.8%
3712832 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.72 65.0 5.13e-01 100.0% 52.7%
4022461 2.1.1.52 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Stn1 0.72 66.0 4.83e-01 100.0% 48.3%
3593304 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 64.0 5.57e-01 100.0% 68.8%
3906493 2.1.1.142 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB 0.72 65.0 5.54e-01 100.0% 63.1%
3385523 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 65.0 5.86e-01 100.0% 75.5%
1411292 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.72 49.0 4.23e-01 70.4% 70.2%
4987465 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 63.0 5.96e-01 100.0% 81.9%
4402425 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.71 56.0 5.91e-01 97.5% 97.1%
4235194 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.71 49.0 4.18e-01 70.4% 78.4%
4030766 2.1.1.38 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.71 57.0 5.79e-01 100.0% 87.5%
5026716 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.71 64.0 5.80e-01 100.0% 77.3%
3172086 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.71 64.0 5.71e-01 100.0% 72.2%
3242941 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 56.0 5.98e-01 96.3% 100.0%
3226147 2.1.1.44 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.70 61.0 6.03e-01 97.5% 89.4%
4952176 2.18.1.0 beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins 0.70 60.0 6.27e-01 100.0% 100.0%
4380962 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.70 53.0 4.86e-01 80.2% 95.2%
3970949 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.70 48.0 4.23e-01 70.4% 73.0%
4408024 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.69 44.0 5.00e-01 91.4% 86.7%
3626166 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 57.0 5.64e-01 100.0% 85.9%
3587789 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.69 47.0 4.29e-01 70.4% 76.2%
3239000 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 63.0 5.32e-01 100.0% 62.3%
4962316 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.69 47.0 4.01e-01 70.4% 66.9%
3963148 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.69 61.0 5.67e-01 97.5% 82.0%
4451383 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.68 61.0 5.06e-01 100.0% 57.9%
4946191 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 57.0 5.86e-01 95.1% 97.4%
3424196 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.68 59.0 5.89e-01 100.0% 91.8%
3967545 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.68 59.0 4.72e-01 96.3% 83.7%
3193320 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 61.0 4.75e-01 100.0% 52.9%
3985171 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.66 58.0 4.81e-01 96.3% 97.1%
5077813 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.65 50.0 4.16e-01 80.2% 76.3%
4998346 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.65 58.0 4.94e-01 98.8% 94.6%
3620698 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.64 55.0 5.25e-01 100.0% 81.1%
379 2.1.1.108 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SBB_T7 0.63 54.0 4.28e-01 100.0% 92.8%
4998344 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.63 57.0 4.77e-01 98.8% 90.3%
5080202 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.62 55.0 4.76e-01 97.5% 96.8%
4615329 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 53.0 4.86e-01 98.8% 89.1%
4237578 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.61 54.0 4.69e-01 96.3% 100.0%
4512935 2.4.1.3 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.60 52.0 4.51e-01 97.5% 94.5%
4236717 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.58 50.0 4.37e-01 93.8% 100.0%
4079889 3454.1.1.7 beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › PF28060 0.58 41.0 4.52e-01 92.6% 92.3%
2544590 2.1.1.58 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF35_N 0.57 50.0 4.42e-01 97.5% 89.8%
4984579 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.57 46.0 2.82e-01 86.4% 30.9%
4073602 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.56 49.0 4.46e-01 97.5% 100.0%
3979396 3454.1.1.4 beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › HofP 0.52 41.0 4.17e-01 96.3% 87.5%
4963533 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.50 42.0 3.68e-01 91.4% 86.7%