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IMGVR_UViG_3300026080_000031-3300026080-Ga0207963_10086345
Arc-VirIMGVR_UViG_3300026080_000031-3300026080-Ga0207963_10086345
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-118
Domain cluster:
rep: IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_100038483__D2-86
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3by7E00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.95 | 63.0 | 7.67e-01 | 79.1% | 98.7% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 44.0 | 5.34e-01 | 70.0% | 80.8% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 45.0 | 5.37e-01 | 71.8% | 82.7% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 42.0 | 4.29e-01 | 70.9% | 59.0% |
| 4c92A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 55.0 | 5.16e-01 | 100.0% | 66.2% |
| 6v4xC01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 40.0 | 4.21e-01 | 70.9% | 60.0% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.62 | 37.0 | 4.23e-01 | 80.0% | 83.1% |
| 1ne8A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 49.0 | 4.82e-01 | 85.5% | 94.0% |
| 3jscA00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 47.0 | 5.03e-01 | 85.5% | 97.9% |
| 1xjvA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 44.0 | 4.00e-01 | 80.9% | 94.6% |
| 2a1rB01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.57 | 40.0 | 3.03e-01 | 72.7% | 77.7% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.56 | 26.0 | 3.54e-01 | 70.0% | 87.0% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.54 | 30.0 | 2.56e-01 | 71.8% | 30.9% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4813032 | 4.1.1.328 ↗ | beta barrels › SH3 › SH3 › SH3 › Sm_like | 0.93 | 64.0 | 7.56e-01 | 81.8% | 97.5% |
| 2325340 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.84 | 46.0 | 4.84e-01 | 76.4% | 60.0% |
| 4961804 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 50.0 | 5.97e-01 | 73.6% | 89.3% |
| 3690549 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 44.0 | 5.46e-01 | 74.5% | 85.7% |
| 3617549 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.75 | 42.0 | 4.35e-01 | 70.0% | 58.1% |
| 3396989 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.75 | 41.0 | 4.34e-01 | 70.9% | 60.0% |
| 3606838 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 41.0 | 4.42e-01 | 70.9% | 63.2% |
| 2581118 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.73 | 40.0 | 3.98e-01 | 70.0% | 51.8% |
| 3168781 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.71 | 43.0 | 4.48e-01 | 71.8% | 64.8% |
| 3593085 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 52.0 | 5.36e-01 | 76.4% | 80.6% |
| 4976962 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 51.0 | 5.35e-01 | 75.5% | 82.0% |
| 3785079 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.70 | 54.0 | 4.92e-01 | 100.0% | 62.1% |
| 5048974 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 38.0 | 3.86e-01 | 70.9% | 55.5% |
| 3197566 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.68 | 47.0 | 4.97e-01 | 70.9% | 79.0% |
| 3233110 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.65 | 42.0 | 4.42e-01 | 70.0% | 73.5% |
| 3576729 | 375.1.1.146 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CCCH_Mcm10 | 0.62 | 27.0 | 3.68e-01 | 90.0% | 80.0% |
| 3948209 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 36.0 | 4.25e-01 | 80.9% | 85.3% |
| 3576534 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.61 | 42.0 | 3.57e-01 | 70.9% | 67.8% |
| 5050188 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 38.0 | 4.20e-01 | 71.8% | 78.9% |
| 3177469 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 33.0 | 4.04e-01 | 72.7% | 88.6% |
| 3497683 | 4.1.1.309 ↗ | beta barrels › SH3 › SH3 › SH3 › MRP-S34 | 0.57 | 42.0 | 3.80e-01 | 95.5% | 56.7% |
| 3821922 | 4.1.1.299 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, KOW1_SPT5 | 0.56 | 40.0 | 3.88e-01 | 74.5% | 96.8% |
| 5003966 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 25.0 | 3.17e-01 | 75.5% | 72.3% |
| 4323235 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.52 | 37.0 | 3.80e-01 | 73.6% | 74.5% |
| 4436471 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.51 | 24.0 | 2.49e-01 | 86.4% | 41.9% |