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IMGVR_UViG_3300026176_000384-3300026176-Ga0265409_10424523
Arc-VirIMGVR_UViG_3300026176_000384-3300026176-Ga0265409_10424523
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 196-275
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1loxA01 | 1.20.245.10 | Mainly Alpha › Up-down Bundle › Lipoxygenase-1; domain 5 › Lipoxygenase-1; Domain 5 | 0.57 | 44.0 | 2.80e-01 | 100.0% | 16.0% |
| 4nreA02 | 1.20.245.10 | Mainly Alpha › Up-down Bundle › Lipoxygenase-1; domain 5 › Lipoxygenase-1; Domain 5 | 0.56 | 44.0 | 2.75e-01 | 100.0% | 15.4% |
| 7x0fA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.55 | 40.0 | 3.30e-01 | 78.8% | 52.7% |
| 2fnqA02 | 1.20.245.10 | Mainly Alpha › Up-down Bundle › Lipoxygenase-1; domain 5 › Lipoxygenase-1; Domain 5 | 0.55 | 44.0 | 2.75e-01 | 100.0% | 15.8% |
| 1tfeA02 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.54 | 31.0 | 3.92e-01 | 77.5% | 100.0% |
| 7aj9A01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.54 | 38.0 | 4.13e-01 | 85.0% | 88.1% |
| 4e69A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 45.0 | 3.06e-01 | 95.0% | 84.5% |
| 3llcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 45.0 | 3.17e-01 | 98.8% | 86.6% |
| 2wxfA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 39.0 | 3.51e-01 | 83.7% | 70.6% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995745 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.86 | 80.0 | 5.17e-01 | 100.0% | 29.2% |
| 3924916 | 2002.1.1.73 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT | 0.72 | 66.0 | 4.18e-01 | 100.0% | 23.4% |
| 3962463 | 4011.1.1.0 ↗ | beta barrels › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins › beta-barrel domain in acetyl-CoA synthetase-like proteins | 0.59 | 31.0 | 3.67e-01 | 100.0% | 74.5% |
| 1177674 | 158.1.1.1 ↗ | alpha bundles › Lipoxygenase › Lipoxygenase › Lipoxygenase › Lipoxygenase | 0.55 | 44.0 | 2.63e-01 | 100.0% | 12.3% |
| 3846092 | 109.4.1.554 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Neurochondrin | 0.54 | 40.0 | 2.36e-01 | 81.2% | 39.7% |
| 4973226 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.53 | 38.0 | 3.39e-01 | 76.2% | 77.5% |
| 3196570 | 7558.1.1.11 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Acyltransferase,Acyltransf_C | 0.53 | 41.0 | 2.65e-01 | 82.5% | 37.9% |
| 3705816 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.52 | 37.0 | 2.84e-01 | 78.8% | 80.5% |
| 3482747 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.51 | 39.0 | 3.52e-01 | 85.0% | 99.2% |
| 3958774 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.50 | 43.0 | 2.98e-01 | 95.0% | 99.3% |
D2
medium
residues 15-195
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jcmP00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 52.0 | 4.59e-01 | 100.0% | 52.5% |
| 5k9xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.71 | 53.0 | 4.67e-01 | 100.0% | 53.6% |
| 4wuiA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 51.0 | 4.87e-01 | 100.0% | 67.8% |
| 2fliC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 53.0 | 5.01e-01 | 100.0% | 70.3% |
| 3ij6A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.66 | 59.0 | 4.96e-01 | 97.8% | 86.1% |
| 2wm1A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.65 | 58.0 | 4.79e-01 | 97.2% | 89.5% |
| 2obbA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.65 | 34.0 | 4.07e-01 | 96.7% | 73.6% |
| 3r89A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 58.0 | 4.90e-01 | 100.0% | 59.5% |
| 2f6kA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.65 | 58.0 | 4.88e-01 | 97.2% | 86.6% |
| 6jqwA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.64 | 59.0 | 4.74e-01 | 100.0% | 63.9% |
| 1uumA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 58.0 | 4.69e-01 | 100.0% | 78.0% |
| 3nurA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.63 | 58.0 | 4.90e-01 | 100.0% | 78.9% |
| 2amxB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.63 | 58.0 | 4.66e-01 | 100.0% | 68.0% |
| 1qwgA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 56.0 | 4.96e-01 | 100.0% | 68.1% |
| 2jbmA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 43.0 | 4.78e-01 | 100.0% | 87.0% |
| 1hg3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 52.0 | 4.80e-01 | 100.0% | 70.1% |
| 5xgbA03 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.62 | 56.0 | 5.05e-01 | 97.2% | 83.9% |
| 3vmnA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 57.0 | 4.48e-01 | 100.0% | 72.1% |
| 4q6jB00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.62 | 56.0 | 5.06e-01 | 97.2% | 80.2% |
| 7f8eA01 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.62 | 51.0 | 4.78e-01 | 100.0% | 70.9% |
| 2ftpA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 56.0 | 4.72e-01 | 98.3% | 68.0% |
| 1vhcF00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 50.0 | 4.75e-01 | 100.0% | 72.8% |
| 2basB01 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.61 | 56.0 | 5.24e-01 | 99.4% | 82.3% |
| 4tv5A00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.61 | 53.0 | 4.76e-01 | 100.0% | 67.8% |
| 3qvqA00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.61 | 56.0 | 5.01e-01 | 100.0% | 74.5% |
| 6hq7B02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.60 | 53.0 | 4.74e-01 | 97.2% | 82.7% |
| 1aa1B02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.60 | 55.0 | 4.58e-01 | 100.0% | 60.4% |
| 3qyqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 54.0 | 4.71e-01 | 100.0% | 72.5% |
| 3k8kA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 53.0 | 4.25e-01 | 98.9% | 55.2% |
| 1pswA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.58 | 33.0 | 3.40e-01 | 96.7% | 57.4% |
| 5c3uA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 30.0 | 3.83e-01 | 75.1% | 88.5% |
| 3qz6A00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.57 | 53.0 | 4.66e-01 | 100.0% | 79.5% |
| 3lteD00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 37.0 | 4.41e-01 | 98.3% | 96.7% |
| 6r62A00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.56 | 52.0 | 4.62e-01 | 100.0% | 81.3% |
| 1g6cB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 47.0 | 4.42e-01 | 100.0% | 73.0% |
| 3nd5A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 32.0 | 3.47e-01 | 96.7% | 69.1% |
| 4hh3C02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.54 | 38.0 | 4.38e-01 | 98.3% | 98.5% |
| 3dl2A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 36.0 | 4.08e-01 | 91.7% | 89.2% |
| 2vptA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.52 | 42.0 | 4.07e-01 | 94.5% | 76.6% |
| 3c85A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 37.0 | 4.02e-01 | 91.7% | 88.0% |
| 2ffeA01 | 3.40.50.10680 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CofD-like domains | 0.51 | 44.0 | 4.21e-01 | 95.6% | 86.8% |
| 6se1A01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.51 | 47.0 | 4.17e-01 | 97.8% | 89.2% |
| 3kd3A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.50 | 34.0 | 3.60e-01 | 95.6% | 77.9% |
| 4qdjA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 39.0 | 3.80e-01 | 82.9% | 96.2% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995745 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.79 | 76.0 | 6.07e-01 | 100.0% | 61.5% |
| 4134169 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.74 | 55.0 | 5.19e-01 | 100.0% | 64.7% |
| 3884122 | 2002.1.1.174 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C | 0.69 | 54.0 | 4.48e-01 | 99.4% | 47.4% |
| 3967116 | 2002.1.1.222 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF934 | 0.69 | 48.0 | 5.12e-01 | 99.4% | 80.0% |
| 4101336 | 2002.1.1.15 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA | 0.69 | 54.0 | 4.89e-01 | 100.0% | 60.5% |
| None | — | 0.69 | 54.0 | 4.89e-01 | 100.0% | 60.5% | |
| 2388498 | 2002.1.1.196 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GH113 | 0.67 | 63.0 | 5.21e-01 | 100.0% | 65.0% |
| None | — | 0.67 | 54.0 | 4.72e-01 | 100.0% | 57.6% | |
| 3692472 | 2002.1.1.134 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 | 0.67 | 60.0 | 4.93e-01 | 98.3% | 83.9% |
| 5004196 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.66 | 62.0 | 5.46e-01 | 100.0% | 72.9% |
| 5071261 | 2002.1.1.134 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 | 0.66 | 58.0 | 4.88e-01 | 95.6% | 86.9% |
| 4093446 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.65 | 60.0 | 4.83e-01 | 100.0% | 56.8% |
| 3731938 | 2002.1.1.134 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 | 0.65 | 58.0 | 4.80e-01 | 97.8% | 87.0% |
| 3725932 | 2002.1.1.134 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 | 0.64 | 59.0 | 4.79e-01 | 100.0% | 71.5% |
| 2701286 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.64 | 58.0 | 5.05e-01 | 96.7% | 74.9% |
| 3696439 | 2002.1.1.100 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ComA | 0.64 | 58.0 | 5.04e-01 | 100.0% | 64.7% |
| 3809946 | 2002.1.1.132 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GcpE | 0.63 | 57.0 | 3.96e-01 | 97.2% | 35.5% |
| 4015681 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.63 | 58.0 | 5.09e-01 | 100.0% | 68.3% |
| 8820 | 2002.1.1.4 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Alpha-amylase | 0.62 | 57.0 | 4.44e-01 | 100.0% | 66.0% |
| 3966569 | 2002.5.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain | 0.62 | 57.0 | 5.10e-01 | 99.4% | 85.3% |
| 3967205 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.61 | 57.0 | 5.03e-01 | 99.4% | 74.1% |
| 4491492 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 54.0 | 4.96e-01 | 96.1% | 77.1% |
| 3987076 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 54.0 | 4.89e-01 | 96.1% | 77.6% |
| 5048704 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.60 | 54.0 | 4.73e-01 | 96.1% | 87.2% |
| 4193998 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.60 | 54.0 | 4.87e-01 | 96.1% | 74.3% |
| 4941332 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.60 | 53.0 | 5.02e-01 | 100.0% | 79.1% |
| 3590188 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.60 | 53.0 | 4.66e-01 | 95.6% | 69.6% |
| 5023888 | 2002.1.1.100 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ComA | 0.60 | 56.0 | 4.97e-01 | 100.0% | 81.6% |
| 4938576 | 2003.6.1.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › ADP_PFK_GK | 0.60 | 54.0 | 4.20e-01 | 98.9% | 96.2% |
| 4008577 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.60 | 55.0 | 4.83e-01 | 100.0% | 87.8% |
| 4679851 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.59 | 52.0 | 4.65e-01 | 96.1% | 91.9% |
| 4677393 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.59 | 54.0 | 5.00e-01 | 100.0% | 77.8% |
| None | — | 0.59 | 54.0 | 4.76e-01 | 100.0% | 75.8% | |
| 3658880 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.58 | 54.0 | 4.62e-01 | 100.0% | 65.6% |
| 5024626 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.58 | 53.0 | 5.05e-01 | 100.0% | 84.8% |
| 4102059 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.58 | 53.0 | 4.87e-01 | 100.0% | 77.0% |
| 4338611 | 2003.1.8.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like | 0.58 | 24.0 | 3.55e-01 | 91.2% | 89.3% |
| 4945643 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.57 | 52.0 | 4.43e-01 | 99.4% | 79.3% |
| 5006887 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.57 | 51.0 | 4.46e-01 | 99.4% | 64.7% |
| 5015934 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.56 | 51.0 | 4.23e-01 | 99.4% | 78.8% |
| 4944164 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.56 | 51.0 | 4.35e-01 | 99.4% | 78.0% |
| 3487184 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.56 | 43.0 | 4.55e-01 | 93.4% | 89.1% |
| 3276001 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.55 | 49.0 | 4.05e-01 | 96.7% | 66.2% |
| 3985472 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.54 | 37.0 | 3.89e-01 | 89.5% | 75.8% |
| 3941023 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.53 | 46.0 | 4.33e-01 | 93.9% | 98.7% |
| 3844606 | 2007.9.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 | 0.53 | 36.0 | 3.82e-01 | 93.9% | 76.9% |
| 2543654 | 2002.1.1.53 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N | 0.53 | 49.0 | 4.56e-01 | 100.0% | 80.7% |
| 4542132 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 37.0 | 3.83e-01 | 72.9% | 73.7% |
| 3619050 | 2004.1.1.163 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KTI12 | 0.52 | 43.0 | 4.21e-01 | 95.6% | 78.5% |
| 4945404 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.52 | 41.0 | 4.11e-01 | 95.0% | 81.0% |
| 3385824 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.52 | 30.0 | 3.64e-01 | 96.7% | 86.7% |
| 3595856 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 37.0 | 3.76e-01 | 73.5% | 94.9% |
| 4167234 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.51 | 33.0 | 3.47e-01 | 76.8% | 69.7% |
| 5076886 | 2004.1.1.88 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW | 0.51 | 41.0 | 3.80e-01 | 97.8% | 67.4% |
| 3292286 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.51 | 34.0 | 3.96e-01 | 91.2% | 98.4% |
| 3296464 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 29.0 | 3.43e-01 | 92.8% | 80.8% |
D3
medium
residues 276-342
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bqhA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.63 | 52.0 | 3.09e-01 | 91.0% | 40.9% |
| 1vm8B01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.61 | 45.0 | 2.77e-01 | 79.1% | 25.3% |
| 3netB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.59 | 35.0 | 3.08e-01 | 86.6% | 40.8% |
| 1eljA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.59 | 39.0 | 2.86e-01 | 71.6% | 24.6% |
| 1l1lA02 | 3.30.1620.10 | Alpha Beta › 2-Layer Sandwich › b-12 dependent (class ii) ribonucleotide reductase, Chain A, Domain 2 › b-12 dependent (class ii) ribonucleotide reductase, Chain A, Domain 2 | 0.58 | 39.0 | 3.37e-01 | 70.1% | 55.4% |
| 2heuB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 37.0 | 2.85e-01 | 70.1% | 26.7% |
| 4nesA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 41.0 | 3.13e-01 | 79.1% | 37.4% |
| 3dr5A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 44.0 | 3.10e-01 | 89.6% | 32.9% |
| 4gm6A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 41.0 | 2.75e-01 | 86.6% | 80.0% |
| 3r4qA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 42.0 | 3.51e-01 | 91.0% | 93.9% |
| 5x7fA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 43.0 | 3.06e-01 | 88.1% | 35.4% |
| 3lkdA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 37.0 | 2.48e-01 | 74.6% | 64.5% |
| 1vqzA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 34.0 | 2.45e-01 | 70.1% | 65.7% |
| 2avdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 40.0 | 2.83e-01 | 88.1% | 27.9% |
| 7jj9A02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.51 | 35.0 | 2.97e-01 | 71.6% | 77.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969558 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.68 | 42.0 | 3.07e-01 | 91.0% | 22.3% |
| 4959553 | 7523.1.1.19 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › NMT1 | 0.59 | 39.0 | 3.44e-01 | 86.6% | 47.4% |
| 3637892 | 2007.9.1.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › PF29907 | 0.57 | 49.0 | 3.67e-01 | 98.5% | 77.1% |
| 4532648 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.56 | 36.0 | 3.17e-01 | 79.1% | 43.4% |
| 3624992 | 2496.1.1.1 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO | 0.55 | 43.0 | 3.13e-01 | 88.1% | 47.8% |
| 3661331 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.53 | 41.0 | 3.15e-01 | 86.6% | 85.3% |
| None | — | 0.53 | 43.0 | 2.99e-01 | 88.1% | 32.6% | |
| 4017968 | 7514.1.1.0 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.53 | 41.0 | 3.33e-01 | 82.1% | 95.0% |
| 4636211 | 2003.1.5.14 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_3 | 0.52 | 43.0 | 2.96e-01 | 88.1% | 31.8% |
| 3999963 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.52 | 37.0 | 3.11e-01 | 77.6% | 80.8% |
| 3962957 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.52 | 42.0 | 3.01e-01 | 88.1% | 35.2% |
| 3931871 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.52 | 39.0 | 3.07e-01 | 80.6% | 97.1% |
| 3394450 | 2496.1.1.1 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO | 0.52 | 44.0 | 3.17e-01 | 100.0% | 68.8% |
| 3945710 | 7514.1.1.4 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › DmmA-like_N | 0.52 | 40.0 | 3.25e-01 | 82.1% | 96.7% |
| 3449648 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.51 | 39.0 | 2.39e-01 | 83.6% | 15.7% |
| 3668524 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.51 | 39.0 | 3.47e-01 | 83.6% | 100.0% |
| 3646611 | 222.1.1.2 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl-ACP_TE | 0.51 | 43.0 | 3.18e-01 | 94.0% | 94.9% |
| 3677044 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 37.0 | 2.62e-01 | 82.1% | 42.4% |
| 3903008 | 2496.1.1.6 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO_2 | 0.50 | 43.0 | 3.30e-01 | 100.0% | 54.7% |