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IMGVR_UViG_3300026186_000102-3300026186-Ga0208128_10029338
Arc-VirIMGVR_UViG_3300026186_000102-3300026186-Ga0208128_10029338
Identity
- Kingdom:
- archaea
Quality
74.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-96
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26809.1 best | Phage_T4_gp13 | 63.3 | 3.80e-17 | 100.0% | 36.6% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4v1al00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.59 | 32.0 | 2.84e-01 | 94.6% | 36.1% |
| 2xmjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 32.0 | 3.74e-01 | 97.8% | 82.5% |
| 2kt2A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 31.0 | 3.44e-01 | 98.9% | 78.3% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4342483 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.65 | 40.0 | 4.11e-01 | 77.2% | 63.3% |
| 3392896 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.64 | 42.0 | 4.42e-01 | 78.3% | 74.1% |
| 3685640 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.57 | 41.0 | 4.28e-01 | 89.1% | 82.4% |
| 3400596 | 5051.1.1.1 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SNF | 0.56 | 44.0 | 2.71e-01 | 84.8% | 76.9% |
| 3515089 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.54 | 33.0 | 3.73e-01 | 95.7% | 80.9% |
| 3627709 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.54 | 42.0 | 3.46e-01 | 89.1% | 44.8% |
| 4226064 | 3433.1.2.0 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain | 0.52 | 27.0 | 3.40e-01 | 91.3% | 97.8% |
| 3223025 | 5001.1.1.65 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Serpentine_r_xa | 0.52 | 43.0 | 3.11e-01 | 94.6% | 66.3% |
D2
high
residues 104-166
Domain cluster:
rep: MT968995.1__QOQ37529.1__vBEcoMWL3_gp153__00151__D48-105
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26809.1 best | Phage_T4_gp13 | 94.4 | 1.20e-26 | 100.0% | 25.5% |