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IMGVR_UViG_3300026186_000102-3300026186-Ga0208128_10029338

Arc-Vir

IMGVR_UViG_3300026186_000102-3300026186-Ga0208128_10029338

Quality

74.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-96
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26809.1 best Phage_T4_gp13 63.3 3.80e-17 100.0% 36.6%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4v1al00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.59 32.0 2.84e-01 94.6% 36.1%
2xmjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 32.0 3.74e-01 97.8% 82.5%
2kt2A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 31.0 3.44e-01 98.9% 78.3%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4342483 1128.1.1.1 alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.65 40.0 4.11e-01 77.2% 63.3%
3392896 1128.1.1.1 alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.64 42.0 4.42e-01 78.3% 74.1%
3685640 1128.1.1.0 alpha bundles › LYR protein › LYR protein › LYR protein 0.57 41.0 4.28e-01 89.1% 82.4%
3400596 5051.1.1.1 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SNF 0.56 44.0 2.71e-01 84.8% 76.9%
3515089 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.54 33.0 3.73e-01 95.7% 80.9%
3627709 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.54 42.0 3.46e-01 89.1% 44.8%
4226064 3433.1.2.0 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain 0.52 27.0 3.40e-01 91.3% 97.8%
3223025 5001.1.1.65 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Serpentine_r_xa 0.52 43.0 3.11e-01 94.6% 66.3%
D2 high residues 104-166
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26809.1 best Phage_T4_gp13 94.4 1.20e-26 100.0% 25.5%