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IMGVR_UViG_3300026194_000194-3300026194-Ga0209509_100203222
Arc-VirIMGVR_UViG_3300026194_000194-3300026194-Ga0209509_100203222
Identity
- Kingdom:
- archaea
Quality
82.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-95
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3citA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.63 | 48.0 | 3.99e-01 | 98.9% | 46.5% |
| 4ew7A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 36.0 | 3.35e-01 | 88.8% | 48.7% |
| 5x6vF00 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 38.0 | 3.54e-01 | 97.8% | 50.0% |
| 3r7wC02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 32.0 | 3.08e-01 | 85.4% | 43.0% |
| 7bjkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.57 | 48.0 | 4.53e-01 | 97.8% | 85.8% |
| 3mvgB02 | 4.10.470.10 | Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 | 0.56 | 31.0 | 3.16e-01 | 79.8% | 52.9% |
| 2l6oA01 | 2.40.10.320 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Uncharacterised protein PF13642 yp_926445, N-terminal domain | 0.56 | 34.0 | 3.67e-01 | 74.2% | 73.6% |
| 1t3yA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.55 | 46.0 | 4.13e-01 | 94.4% | 64.1% |
| 3d33A00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 36.0 | 3.53e-01 | 76.4% | 62.8% |
| 2v0uA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 41.0 | 3.52e-01 | 80.9% | 62.3% |
| 3onhA01 | 3.10.290.20 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-like 2 activating enzyme e1b. Chain: B, domain 3 | 0.54 | 36.0 | 3.41e-01 | 79.8% | 55.9% |
| 4y97D00 | 1.10.3200.20 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger | 0.52 | 36.0 | 2.83e-01 | 71.9% | 43.8% |
| 2dr1A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 43.0 | 3.81e-01 | 93.3% | 74.1% |
| 2dhoA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 38.0 | 2.98e-01 | 80.9% | 82.3% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3184727 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.69 | 31.0 | 3.34e-01 | 71.9% | 47.5% |
| 3234124 | 355.1.1.2 ↗ | few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › PSI | 0.62 | 36.0 | 4.23e-01 | 77.5% | 85.0% |
| 4020851 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 37.0 | 3.29e-01 | 96.6% | 41.5% |
| 4944953 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.60 | 32.0 | 3.04e-01 | 73.0% | 42.9% |
| 3404658 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 39.0 | 4.10e-01 | 73.0% | 76.2% |
| 4573861 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 31.0 | 3.67e-01 | 75.3% | 76.7% |
| 1137618 | 839.1.1.0 ↗ | a+b complex topology › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain | 0.57 | 39.0 | 3.32e-01 | 98.9% | 44.3% |
| 4406921 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 28.0 | 2.93e-01 | 86.5% | 44.7% |
| 3177995 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.56 | 41.0 | 2.59e-01 | 78.7% | 31.7% |
| 4274058 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.55 | 44.0 | 4.36e-01 | 87.6% | 89.5% |
| 4191334 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.54 | 40.0 | 3.41e-01 | 76.4% | 61.9% |
| 3238409 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.54 | 41.0 | 3.91e-01 | 89.9% | 68.6% |
| 4980287 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.53 | 30.0 | 3.15e-01 | 82.0% | 57.6% |
| 3923606 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.53 | 40.0 | 3.45e-01 | 80.9% | 84.8% |
| 3504789 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.53 | 39.0 | 3.44e-01 | 77.5% | 84.4% |
| 4611041 | 7512.1.1.17 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_90 | 0.53 | 46.0 | 3.25e-01 | 100.0% | 68.5% |
| 3575328 | 1081.1.1.1 ↗ | alpha arrays › Glycogen debranching enzyme (GDE) insertion domain › Glycogen debranching enzyme (GDE) insertion domain › Glycogen debranching enzyme (GDE) insertion domain › hDGE_amylase | 0.53 | 42.0 | 3.27e-01 | 100.0% | 37.6% |
| 3880676 | 2.1.1.86 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_Dis3 | 0.52 | 31.0 | 3.14e-01 | 79.8% | 58.9% |
| 5046988 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.51 | 41.0 | 4.12e-01 | 88.8% | 89.4% |
| 5050476 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.51 | 42.0 | 3.98e-01 | 88.8% | 79.0% |
| 4933077 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.51 | 41.0 | 4.07e-01 | 88.8% | 89.5% |
| 5044154 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.51 | 41.0 | 4.05e-01 | 88.8% | 90.3% |
| 3624443 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 44.0 | 2.92e-01 | 97.8% | 46.9% |