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IMGVR_UViG_3300026194_000194-3300026194-Ga0209509_100203232

Arc-Vir

IMGVR_UViG_3300026194_000194-3300026194-Ga0209509_100203232

Quality

76.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 139-204
PDB
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ccvA00 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.75 68.0 5.92e-01 100.0% 96.0%
2vm9A02 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.74 66.0 5.80e-01 100.0% 89.8%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.73 64.0 5.02e-01 100.0% 79.2%
5ldyA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 61.0 5.23e-01 100.0% 76.4%
3vmnA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 60.0 4.67e-01 98.5% 71.8%
1qfhA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 54.0 4.78e-01 90.9% 65.3%
3wmqA00 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 58.0 5.20e-01 100.0% 85.1%
1txkB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 58.0 4.84e-01 100.0% 80.9%
2vo8A00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 57.0 4.55e-01 100.0% 56.3%
4ak2A01 2.60.40.2720 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 56.0 4.69e-01 100.0% 60.7%
5ldyB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 54.0 4.80e-01 100.0% 80.0%
4llfD02 2.60.40.4030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 54.0 4.49e-01 100.0% 55.8%
3l81A02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.62 54.0 4.64e-01 100.0% 60.0%
3io1A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 50.0 4.23e-01 90.9% 86.2%
2di7A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 52.0 4.58e-01 100.0% 82.2%
3fcsA03 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.62 53.0 4.28e-01 100.0% 52.5%
2gv9B04 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.61 49.0 3.56e-01 89.4% 75.6%
2x8kA03 2.60.120.860 Mainly Beta › Sandwich › Jelly Rolls › 0.61 52.0 4.47e-01 100.0% 97.3%
2w5fB01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 51.0 4.03e-01 100.0% 70.4%
5t4mA02 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.60 50.0 4.39e-01 100.0% 85.2%
2wmfA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.59 50.0 4.17e-01 98.5% 51.6%
5jpnB04 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.59 50.0 4.22e-01 100.0% 81.0%
1ig0A02 2.60.120.320 Mainly Beta › Sandwich › Jelly Rolls › Thiamin pyrophosphokinase, thiamin-binding domain 0.58 49.0 4.08e-01 100.0% 65.4%
7tg5A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 50.0 4.32e-01 100.0% 64.5%
3cq9A00 3.40.50.10240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain 0.58 49.0 3.58e-01 100.0% 37.6%
7oo1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.57 46.0 4.45e-01 90.9% 98.7%
3zmrA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 48.0 4.52e-01 100.0% 81.2%
3oq3B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 47.0 4.20e-01 100.0% 82.5%
1hn0A04 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.56 50.0 4.09e-01 100.0% 56.6%
6qdiA02 3.90.182.10 Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 0.56 48.0 3.90e-01 100.0% 73.7%
1gzhA00 2.60.40.720 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 46.0 3.49e-01 100.0% 72.7%
2je8B05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 46.0 4.32e-01 100.0% 80.9%
5x6vG00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.56 40.0 3.28e-01 77.3% 65.9%
7oocE01 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.55 43.0 4.00e-01 86.4% 91.8%
4obxA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 41.0 2.89e-01 83.3% 43.4%
1iv8A05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 37.0 3.79e-01 100.0% 72.7%
3w7tA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.54 46.0 3.26e-01 100.0% 68.1%
3i4hX02 3.30.70.1900 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 42.0 3.75e-01 89.4% 87.5%
3gtyX02 3.10.50.30 Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain 0.54 32.0 3.01e-01 89.4% 44.0%
4dzdA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.54 42.0 3.51e-01 87.9% 83.7%
3kt4A02 3.60.130.20 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain 0.53 45.0 3.00e-01 100.0% 33.5%
3w7bA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 42.0 3.88e-01 89.4% 86.4%
4iefA00 2.60.40.3800 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 45.0 3.33e-01 100.0% 74.0%
3efoB03 2.60.40.1670 Mainly Beta › Sandwich › Immunoglobulin-like › beta-sandwich domain of Sec23/24 0.53 45.0 3.66e-01 100.0% 50.4%
5tpvB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 47.0 3.69e-01 100.0% 56.5%
3x1lB03 2.60.40.4350 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 43.0 3.78e-01 95.5% 83.8%
1dv2A02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.52 42.0 2.85e-01 93.9% 59.1%
3fjsC00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 45.0 3.87e-01 100.0% 65.4%
4qkbA00 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.51 40.0 3.07e-01 92.4% 90.5%
3d0jA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 43.0 3.50e-01 100.0% 60.1%
4indA02 2.60.120.1310 Mainly Beta › Sandwich › Jelly Rolls › 0.50 41.0 3.62e-01 100.0% 67.9%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3588730 4182.1.1.0 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.78 70.0 6.21e-01 100.0% 70.5%
5029506 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.74 67.0 5.55e-01 100.0% 73.0%
5029507 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.73 65.0 5.47e-01 100.0% 76.4%
5028536 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.72 64.0 5.06e-01 100.0% 61.5%
4964597 11.1.1.39 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_1 0.69 61.0 5.25e-01 100.0% 76.2%
3595999 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 59.0 5.09e-01 100.0% 76.4%
3649226 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.68 58.0 3.58e-01 100.0% 16.1%
4968498 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 58.0 4.97e-01 100.0% 80.9%
4945626 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 54.0 4.96e-01 97.0% 81.1%
5029535 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 58.0 5.00e-01 100.0% 81.0%
5080991 11.1.1.351 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › K319L-like_PKD 0.66 57.0 5.09e-01 100.0% 73.7%
5035809 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.66 57.0 5.21e-01 100.0% 78.9%
5044775 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 53.0 4.66e-01 100.0% 61.0%
2066818 11.1.1.123 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Invasin_D3 0.64 55.0 4.80e-01 100.0% 76.7%
3212025 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 55.0 4.88e-01 100.0% 66.0%
3602447 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.63 56.0 4.14e-01 100.0% 39.4%
3251457 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 54.0 4.31e-01 100.0% 63.6%
3537241 389.3.1.23 few secondary structure elements › EGF-like › LDL receptor-like module › LDL receptor-like module › GON 0.63 54.0 4.05e-01 100.0% 52.6%
4955862 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 53.0 4.78e-01 100.0% 87.4%
3396431 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 53.0 4.59e-01 100.0% 79.1%
3591502 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 53.0 4.65e-01 100.0% 62.9%
3528647 922.1.1.30 few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › GON 0.62 53.0 4.00e-01 100.0% 54.4%
3260183 11.1.1.701 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_SIBA-E_3rd 0.61 51.0 3.27e-01 100.0% 55.5%
3260574 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 52.0 4.48e-01 100.0% 82.7%
4945363 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.61 52.0 4.71e-01 100.0% 76.8%
3762560 11.1.1.178 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.61 53.0 4.76e-01 100.0% 75.8%
5043411 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.60 52.0 4.22e-01 100.0% 50.0%
4976868 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 48.0 4.46e-01 93.9% 74.4%
5012588 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 51.0 4.84e-01 100.0% 98.8%
3254101 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 52.0 4.81e-01 100.0% 78.8%
3263511 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 51.0 4.17e-01 100.0% 65.4%
4955095 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.59 49.0 4.63e-01 100.0% 83.5%
4956625 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.58 50.0 4.68e-01 100.0% 83.5%
3591505 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 49.0 4.51e-01 100.0% 73.3%
3274460 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 49.0 4.01e-01 100.0% 64.4%
5064131 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 49.0 4.31e-01 100.0% 81.9%
4949379 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.58 51.0 4.46e-01 100.0% 94.0%
3492980 11.1.1.891 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26189 0.58 49.0 3.88e-01 100.0% 55.3%
2519439 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 47.0 4.04e-01 100.0% 81.1%
3618345 11.1.1.12 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.57 49.0 4.18e-01 100.0% 60.9%
3580269 11.1.1.12 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.57 49.0 4.41e-01 100.0% 71.6%
4981174 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 47.0 4.21e-01 100.0% 81.0%
3575359 11.1.1.12 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.56 49.0 4.18e-01 100.0% 62.7%
4957071 325.1.5.1 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal protein L10e › Ribosomal_L16 0.56 42.0 3.72e-01 84.8% 86.7%
None 0.56 38.0 2.51e-01 72.7% 29.4%
None 0.56 43.0 2.68e-01 84.8% 18.0%
3274779 11.1.1.701 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_SIBA-E_3rd 0.56 47.0 3.61e-01 100.0% 50.0%
3774176 11.1.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.56 47.0 3.94e-01 100.0% 84.0%
1558823 325.1.1.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like 0.55 43.0 3.62e-01 92.4% 60.3%
3507952 11.1.1.12 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.55 46.0 3.11e-01 100.0% 34.4%
3961820 10.20.1.2 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N 0.54 45.0 3.98e-01 100.0% 66.4%
3955793 10.20.1.2 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N 0.54 44.0 3.67e-01 100.0% 54.1%
3820049 872.1.1.1 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N 0.53 38.0 3.62e-01 78.8% 95.0%
4190415 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.53 37.0 3.14e-01 77.3% 64.8%
4052457 10.12.1.61 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HgmA_N 0.53 38.0 2.63e-01 100.0% 20.8%
3244403 11.1.1.13 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Motile_Sperm 0.52 43.0 3.57e-01 100.0% 58.5%
3598133 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.52 39.0 2.61e-01 84.8% 85.0%
3496203 872.3.1.0 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.51 45.0 3.95e-01 100.0% 72.0%
D2 medium residues 1-100
PDB