←Back to structures
IMGVR_UViG_3300026194_000219-3300026194-Ga0209509_100312112
Arc-VirIMGVR_UViG_3300026194_000219-3300026194-Ga0209509_100312112
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-89
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.79 | 65.0 | 5.04e-01 | 93.0% | 43.1% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.77 | 69.0 | 6.21e-01 | 97.7% | 95.7% |
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.77 | 67.0 | 5.17e-01 | 93.0% | 48.0% |
| 4z85A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.72 | 62.0 | 4.77e-01 | 95.3% | 61.9% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.71 | 60.0 | 6.24e-01 | 91.9% | 100.0% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.71 | 55.0 | 5.19e-01 | 95.3% | 69.6% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.70 | 61.0 | 5.16e-01 | 95.3% | 85.2% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 47.0 | 4.51e-01 | 76.7% | 63.5% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 57.0 | 5.37e-01 | 96.5% | 90.5% |
| 3szeA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 57.0 | 3.92e-01 | 98.8% | 34.4% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 45.0 | 4.64e-01 | 82.6% | 80.7% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.61 | 54.0 | 5.01e-01 | 98.8% | 91.7% |
| 1wdiA02 | 2.40.10.240 | Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like | 0.61 | 45.0 | 4.75e-01 | 93.0% | 91.8% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 49.0 | 4.68e-01 | 94.2% | 75.8% |
| 1a3qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 44.0 | 4.29e-01 | 80.2% | 68.4% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 43.0 | 4.29e-01 | 80.2% | 71.4% |
| 4i0kA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 44.0 | 4.26e-01 | 77.9% | 69.5% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 45.0 | 4.53e-01 | 80.2% | 80.2% |
| 1boqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 48.0 | 4.54e-01 | 93.0% | 80.4% |
| 1ao7B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 4.00e-01 | 79.1% | 68.0% |
| 7uwjC02 | 2.60.40.2150 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 | 0.56 | 39.0 | 3.83e-01 | 80.2% | 66.0% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 3.90e-01 | 79.1% | 69.2% |
| 4cj0A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 38.0 | 3.74e-01 | 79.1% | 65.3% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 3.78e-01 | 77.9% | 62.4% |
| 2f68X01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 40.0 | 3.52e-01 | 82.6% | 76.8% |
| 2b5iC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.75e-01 | 89.5% | 68.8% |
| 1p7hL02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.76e-01 | 83.7% | 66.4% |
| 2dpyA00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 42.0 | 2.73e-01 | 88.4% | 50.9% |
| 2wngA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.75e-01 | 76.7% | 74.7% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 38.0 | 3.43e-01 | 79.1% | 88.9% |
| 4wvrB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.63e-01 | 76.7% | 67.7% |
| 2j42A02 | 2.60.120.240 | Mainly Beta › Sandwich › Jelly Rolls › Protective antigen, heptamerisation domain | 0.50 | 38.0 | 3.12e-01 | 84.9% | 68.3% |
| 6hmjA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 38.0 | 3.58e-01 | 81.4% | 89.5% |
| 2vsmA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.50 | 42.0 | 2.83e-01 | 100.0% | 26.2% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3604610 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.79 | 55.0 | 6.22e-01 | 72.1% | 100.0% |
| 184471 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.76 | 67.0 | 6.71e-01 | 93.0% | 97.7% |
| 184486 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.76 | 64.0 | 6.59e-01 | 93.0% | 95.1% |
| 5037173 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 53.0 | 5.15e-01 | 82.6% | 66.3% |
| 3404225 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 56.0 | 4.22e-01 | 93.0% | 33.3% |
| 5026244 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 54.0 | 5.38e-01 | 91.9% | 74.4% |
| 4033712 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 60.0 | 6.11e-01 | 89.5% | 100.0% |
| 3389361 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 55.0 | 5.32e-01 | 84.9% | 75.8% |
| 3816594 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.68 | 61.0 | 4.40e-01 | 100.0% | 94.6% |
| 3289340 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 49.0 | 5.04e-01 | 79.1% | 82.5% |
| 3264338 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 48.0 | 4.73e-01 | 80.2% | 73.3% |
| 3251337 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 47.0 | 4.04e-01 | 81.4% | 48.1% |
| 4510320 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.65 | 45.0 | 4.49e-01 | 77.9% | 68.9% |
| 3246847 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.65 | 53.0 | 4.09e-01 | 98.8% | 39.5% |
| 5037092 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.64 | 40.0 | 4.38e-01 | 91.9% | 77.1% |
| 4954736 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 42.0 | 4.30e-01 | 76.7% | 68.2% |
| 3976133 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 45.0 | 4.44e-01 | 83.7% | 67.4% |
| 5069408 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.63 | 45.0 | 4.51e-01 | 95.3% | 72.2% |
| 4222919 | 1.1.12.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth | 0.63 | 48.0 | 4.29e-01 | 96.5% | 56.8% |
| 4988105 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.63 | 48.0 | 5.26e-01 | 82.6% | 100.0% |
| 3252787 | 11.1.1.214 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Pur_ac_phosph_N | 0.61 | 45.0 | 4.17e-01 | 80.2% | 60.9% |
| 3884573 | 11.1.1.318 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL3Rb_N | 0.61 | 44.0 | 4.40e-01 | 95.3% | 73.3% |
| 4494130 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 44.0 | 4.19e-01 | 82.6% | 67.0% |
| 3596923 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.60 | 46.0 | 4.09e-01 | 81.4% | 70.8% |
| 3700394 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.59 | 46.0 | 4.14e-01 | 81.4% | 74.8% |
| 1501 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 45.0 | 4.38e-01 | 80.2% | 73.4% |
| 5019852 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.59 | 52.0 | 3.95e-01 | 100.0% | 42.4% |
| 3575535 | 1.1.7.113 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11, AAA_12 | 0.59 | 51.0 | 3.18e-01 | 95.3% | 66.7% |
| 3172185 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 45.0 | 4.23e-01 | 84.9% | 73.6% |
| 3263957 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 43.0 | 4.23e-01 | 86.0% | 71.6% |
| 3321290 | 11.1.1.902 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_GEX2_N | 0.58 | 43.0 | 4.00e-01 | 81.4% | 72.2% |
| 5028147 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.58 | 44.0 | 4.09e-01 | 84.9% | 72.2% |
| 5060261 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 41.0 | 4.26e-01 | 93.0% | 81.2% |
| 4968409 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.57 | 45.0 | 4.30e-01 | 86.0% | 75.0% |
| 4109849 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.57 | 46.0 | 4.66e-01 | 95.3% | 90.6% |
| 3960213 | 304.156.1.5 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › PF31086 | 0.57 | 51.0 | 4.62e-01 | 100.0% | 87.0% |
| 3208004 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 41.0 | 2.41e-01 | 75.6% | 13.8% |
| 4953814 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 30.0 | 3.41e-01 | 95.3% | 70.0% |
| 3665218 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.56 | 42.0 | 3.62e-01 | 79.1% | 68.9% |
| 3252482 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.54 | 38.0 | 3.73e-01 | 76.7% | 67.4% |
| 3256726 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 40.0 | 3.68e-01 | 81.4% | 59.1% |
| 3253742 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 38.0 | 3.88e-01 | 77.9% | 77.6% |
| 3891368 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 38.0 | 3.48e-01 | 76.7% | 67.8% |
| 5063878 | 12.3.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N | 0.52 | 45.0 | 3.17e-01 | 100.0% | 77.7% |
| 3900176 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 38.0 | 3.11e-01 | 79.1% | 65.3% |
| 3263949 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 36.0 | 3.58e-01 | 79.1% | 68.4% |
| 3257790 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.50 | 37.0 | 3.28e-01 | 77.9% | 63.2% |
| 3915194 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.50 | 38.0 | 2.56e-01 | 82.6% | 90.0% |
D2
medium
residues 96-261
Domain cluster:
rep: IMGVR_UViG_3300028631_000171-3300028631-Ga0302241_10018834__D104-261
D3
medium
residues 277-288_354-432