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IMGVR_UViG_3300026194_000271-3300026194-Ga0209509_10024851
Arc-VirIMGVR_UViG_3300026194_000271-3300026194-Ga0209509_10024851
Identity
- Kingdom:
- archaea
Quality
94.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-59
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14239.12 best | RRXRR | 39.9 | 5.80e-10 | 100.0% | 30.5% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5a48B00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.54 | 35.0 | 2.97e-01 | 100.0% | 38.5% |
| 3cjnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 46.0 | 3.36e-01 | 98.2% | 52.7% |
| 1a94A00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.51 | 37.0 | 3.26e-01 | 85.5% | 75.8% |
| 1v9kA00 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.51 | 41.0 | 2.79e-01 | 94.5% | 55.5% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4999907 | 2484.1.1.337 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RRXRR | 0.73 | 66.0 | 4.16e-01 | 100.0% | 79.3% |
| 3466949 | 101.1.2.524 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7625 | 0.65 | 48.0 | 3.73e-01 | 83.6% | 37.4% |
| 3583168 | 101.1.2.490 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_CHMP7 | 0.63 | 46.0 | 3.67e-01 | 80.0% | 50.9% |
| 3848736 | 3246.1.1.1 ↗ | few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAM_CR | 0.54 | 37.0 | 3.00e-01 | 74.5% | 83.3% |
| 4012100 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 47.0 | 3.42e-01 | 100.0% | 47.9% |