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IMGVR_UViG_3300026198_000172-3300026198-Ga0209313_10071158

Arc-Vir

IMGVR_UViG_3300026198_000172-3300026198-Ga0209313_10071158

Quality

74.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-116
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.69 47.0 4.85e-01 70.4% 96.3%
1ze0A01 1.20.120.700 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nitrate reductase, subunit delta (NarJ) 0.60 34.0 3.88e-01 78.3% 73.8%
1t6jA03 1.10.274.20 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 0.57 40.0 4.18e-01 76.5% 79.6%
4ii2A02 3.40.50.12550 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Ubiquitin-activating enzyme E1, inactive adenylation domain, subdomain 2 0.53 38.0 3.15e-01 75.7% 65.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5018513 3640.1.1.13 alpha duplicates or obligate multimers › Minor ampullate fibroin 1 C-terminal domain › Minor ampullate fibroin 1 C-terminal domain › Minor ampullate fibroin 1 C-terminal domain › T1RH-like_C 0.63 41.0 4.40e-01 72.2% 77.0%
3393867 601.4.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.58 41.0 4.04e-01 73.9% 77.6%
3914513 181.1.1.6 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › PCM1_C 0.54 36.0 3.65e-01 71.3% 67.0%