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IMGVR_UViG_3300026200_000265-3300026200-Ga0208894_100153619

Arc-Vir

IMGVR_UViG_3300026200_000265-3300026200-Ga0208894_100153619

Quality

86.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-48_64-105
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gvnD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 44.0 3.12e-01 86.5% 45.9%
3s6jE02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.54 40.0 4.43e-01 98.9% 100.0%
2gfhA02 1.20.120.710 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain 0.52 46.0 4.67e-01 97.8% 98.8%
1hekA00 1.10.150.90 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 0.51 44.0 4.06e-01 96.6% 73.3%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.53 37.0 2.64e-01 70.8% 45.4%
3901085 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.53 38.0 2.69e-01 76.4% 45.9%
3212939 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.50 41.0 3.44e-01 88.8% 94.8%