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IMGVR_UViG_3300026205_000020-3300026205-Ga0208406_10009712
Arc-VirIMGVR_UViG_3300026205_000020-3300026205-Ga0208406_10009712
Identity
- Kingdom:
- archaea
Quality
95.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 355-449
Domain cluster:
rep: rifoxya1_full_scaffold_1_prodigal-single.1__X__X__00171__D444-515
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.74 | 44.0 | 4.53e-01 | 74.7% | 62.2% |
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.70 | 45.0 | 4.96e-01 | 74.7% | 81.3% |
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 44.0 | 4.63e-01 | 75.8% | 73.6% |
| 3u28C00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.65 | 45.0 | 4.64e-01 | 76.8% | 73.9% |
| 3dclA02 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 47.0 | 4.80e-01 | 74.7% | 79.1% |
| 3gg8C03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.65 | 48.0 | 4.84e-01 | 77.9% | 78.4% |
| 1zunB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 46.0 | 4.77e-01 | 77.9% | 77.8% |
| 3qtgA02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.65 | 48.0 | 4.87e-01 | 77.9% | 78.7% |
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.64 | 42.0 | 4.51e-01 | 75.8% | 78.8% |
| 7oo1A01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.64 | 44.0 | 4.81e-01 | 70.5% | 88.3% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 45.0 | 4.51e-01 | 74.7% | 78.8% |
| 3t05A02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.63 | 47.0 | 4.72e-01 | 78.9% | 80.4% |
| 7r6yA01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.62 | 42.0 | 4.35e-01 | 70.5% | 77.2% |
| 1g7sA04 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 44.0 | 4.52e-01 | 73.7% | 79.8% |
| 4ohvA03 | 2.40.30.330 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Pre-mRNA cleavage complex subunit Clp1, C-terminal domain | 0.61 | 44.0 | 4.58e-01 | 74.7% | 92.1% |
| 2j5uA03 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.61 | 41.0 | 4.39e-01 | 86.3% | 81.2% |
| 2yweA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 46.0 | 4.60e-01 | 80.0% | 80.0% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.60 | 44.0 | 3.06e-01 | 90.5% | 22.0% |
| 2bn4B03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 43.0 | 3.63e-01 | 74.7% | 70.9% |
| 2npiA03 | 2.40.30.330 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Pre-mRNA cleavage complex subunit Clp1, C-terminal domain | 0.60 | 42.0 | 4.17e-01 | 74.7% | 93.2% |
| 4ba0A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 28.0 | 3.57e-01 | 71.6% | 80.4% |
| 4zgnB00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 51.0 | 5.03e-01 | 100.0% | 87.4% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 47.0 | 4.83e-01 | 100.0% | 93.5% |
| 3qugA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 31.0 | 2.97e-01 | 81.1% | 46.0% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 40.0 | 4.14e-01 | 80.0% | 81.6% |
| 3hrpA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 38.0 | 3.81e-01 | 98.9% | 72.6% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.54 | 40.0 | 3.85e-01 | 87.4% | 68.8% |
| 2yxlA03 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.54 | 32.0 | 3.91e-01 | 98.9% | 98.3% |
| 4p25D01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.52 | 37.0 | 2.95e-01 | 74.7% | 45.4% |
| 2rceA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 42.0 | 4.12e-01 | 91.6% | 81.1% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051090 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 46.0 | 4.99e-01 | 74.7% | 72.5% |
| 4407497 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 45.0 | 5.27e-01 | 73.7% | 86.2% |
| 4943228 | 1.1.7.146 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_Xtn | 0.75 | 44.0 | 5.18e-01 | 72.6% | 84.6% |
| 3975132 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 44.0 | 4.57e-01 | 74.7% | 62.2% |
| 5078547 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.75 | 45.0 | 4.54e-01 | 74.7% | 60.0% |
| 4880433 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 45.0 | 5.11e-01 | 74.7% | 81.4% |
| 4235076 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 46.0 | 4.92e-01 | 74.7% | 73.8% |
| 1758803 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.71 | 45.0 | 5.26e-01 | 75.8% | 95.3% |
| 5064404 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.70 | 42.0 | 5.05e-01 | 74.7% | 93.3% |
| 5038467 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 46.0 | 5.00e-01 | 72.6% | 82.3% |
| 3829837 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.69 | 50.0 | 4.81e-01 | 76.8% | 77.3% |
| 4259810 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.68 | 46.0 | 4.95e-01 | 74.7% | 81.2% |
| 4932128 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.68 | 47.0 | 5.01e-01 | 75.8% | 80.0% |
| 3930882 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 48.0 | 4.84e-01 | 72.6% | 73.7% |
| 5041607 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 43.0 | 4.78e-01 | 72.6% | 81.1% |
| 4964309 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.68 | 43.0 | 4.82e-01 | 72.6% | 82.4% |
| 5057245 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.68 | 48.0 | 4.97e-01 | 77.9% | 77.8% |
| 3602123 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.68 | 51.0 | 5.56e-01 | 97.9% | 96.2% |
| 4954732 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.67 | 48.0 | 4.96e-01 | 77.9% | 78.9% |
| 4926946 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.66 | 43.0 | 4.56e-01 | 73.7% | 75.3% |
| 4311355 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.66 | 49.0 | 4.83e-01 | 77.9% | 82.0% |
| 5015718 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 42.0 | 4.51e-01 | 75.8% | 75.9% |
| 5001027 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.65 | 48.0 | 4.94e-01 | 76.8% | 82.2% |
| 3590326 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.65 | 48.0 | 4.67e-01 | 77.9% | 74.3% |
| 2869319 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.65 | 45.0 | 4.53e-01 | 76.8% | 70.4% |
| 4972564 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.65 | 48.0 | 4.85e-01 | 77.9% | 80.0% |
| 4337888 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.65 | 47.0 | 4.70e-01 | 76.8% | 74.0% |
| 4984743 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.65 | 48.0 | 4.90e-01 | 78.9% | 81.1% |
| 4468653 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.64 | 48.0 | 4.88e-01 | 78.9% | 80.0% |
| 4192745 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.64 | 48.0 | 4.80e-01 | 77.9% | 80.0% |
| 5041618 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.64 | 45.0 | 4.58e-01 | 75.8% | 74.5% |
| 3966502 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.64 | 48.0 | 4.72e-01 | 78.9% | 78.0% |
| 3987212 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.63 | 47.0 | 4.56e-01 | 77.9% | 77.1% |
| 4944119 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.63 | 47.0 | 4.75e-01 | 77.9% | 80.0% |
| 3481480 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.63 | 46.0 | 4.59e-01 | 76.8% | 80.0% |
| 4272870 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.63 | 47.0 | 4.71e-01 | 77.9% | 80.0% |
| 3281973 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.62 | 47.0 | 4.74e-01 | 78.9% | 80.0% |
| 3880866 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.62 | 47.0 | 4.53e-01 | 78.9% | 75.2% |
| None | — | 0.62 | 47.0 | 4.64e-01 | 80.0% | 80.0% | |
| 4952455 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.61 | 47.0 | 4.82e-01 | 82.1% | 97.8% |
| 4158768 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.60 | 48.0 | 4.63e-01 | 83.2% | 81.9% |
| 4932427 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.60 | 45.0 | 4.67e-01 | 81.1% | 95.6% |
| 3388074 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.60 | 43.0 | 4.49e-01 | 76.8% | 80.0% |
| 4668791 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.59 | 47.0 | 4.64e-01 | 100.0% | 80.0% |
| 3599398 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.58 | 50.0 | 4.95e-01 | 100.0% | 90.0% |
| 3698630 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.58 | 52.0 | 5.07e-01 | 100.0% | 88.6% |
| 4945827 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.57 | 48.0 | 4.97e-01 | 97.9% | 96.7% |
| 3256507 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 40.0 | 4.16e-01 | 96.8% | 82.4% |
| 1171020 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.56 | 47.0 | 4.69e-01 | 98.9% | 91.7% |
| None | — | 0.54 | 46.0 | 3.08e-01 | 91.6% | 72.4% | |
| 4949095 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.52 | 45.0 | 2.92e-01 | 92.6% | 82.2% |
D2
medium
residues 5-37_176-192_299-310_326-351_459-485
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ua3A03 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.52 | 41.0 | 3.34e-01 | 81.7% | 82.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2504393 | 3899.1.1.2 ↗ | beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 › BW3TFN | 0.76 | 71.0 | 6.02e-01 | 100.0% | 94.4% |
| 3738740 | 3698.1.1.2 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › PRMT_C | 0.51 | 40.0 | 3.40e-01 | 82.6% | 84.7% |
D3
medium
residues 206-287
Domain cluster:
rep: BML_09012016_9m_scaffold_2_prodigal-single.1__X__X__00049__D582-664
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8p2bA01 | 3.90.1010.20 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.65 | 44.0 | 4.49e-01 | 70.7% | 100.0% |
| 2kzxA00 | 3.90.1010.20 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.61 | 42.0 | 3.65e-01 | 72.0% | 93.9% |
| 3vmaA03 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.61 | 43.0 | 4.21e-01 | 74.4% | 96.7% |
| 1k70A01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.59 | 42.0 | 3.69e-01 | 73.2% | 77.6% |
| 1tm0A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.59 | 39.0 | 3.14e-01 | 95.1% | 34.8% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.58 | 39.0 | 3.81e-01 | 84.1% | 63.3% |
| 4g1vA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 43.0 | 3.90e-01 | 84.1% | 81.4% |
| 2cx7A00 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.57 | 49.0 | 4.28e-01 | 98.8% | 96.9% |
| 3hjhA02 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.55 | 40.0 | 4.00e-01 | 76.8% | 97.7% |
| 4npjB02 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 46.0 | 3.94e-01 | 100.0% | 72.5% |
| 3ks7A01 | 2.60.120.1570 | Mainly Beta › Sandwich › Jelly Rolls › Peptide-N-glycosidase F, N-terminal domain | 0.54 | 45.0 | 3.50e-01 | 100.0% | 65.6% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 41.0 | 3.78e-01 | 82.9% | 63.6% |
| 2oplA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.53 | 38.0 | 3.11e-01 | 78.0% | 54.1% |
| 2cc3A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.53 | 41.0 | 3.46e-01 | 85.4% | 93.8% |
| 2lgnA00 | 2.60.40.2850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 34.0 | 3.66e-01 | 91.5% | 81.8% |
| 1fx5B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 3.30e-01 | 100.0% | 69.0% |
| 2wsuB02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 43.0 | 3.72e-01 | 97.6% | 88.2% |
| 2wpwC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 43.0 | 3.01e-01 | 97.6% | 45.8% |
| 3vv1A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 43.0 | 3.73e-01 | 97.6% | 84.4% |
| 5h9kA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 42.0 | 3.57e-01 | 96.3% | 71.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5075930 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.60 | 52.0 | 4.49e-01 | 97.6% | 95.5% |
| 3450074 | 11.2.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 | 0.58 | 50.0 | 4.09e-01 | 100.0% | 72.1% |
| 5029720 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.58 | 47.0 | 4.41e-01 | 89.0% | 97.0% |
| 3980186 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.57 | 43.0 | 3.46e-01 | 82.9% | 65.3% |
| 4979803 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 43.0 | 4.03e-01 | 98.8% | 66.7% |
| 4932659 | 244.1.1.16 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GGR_cat | 0.55 | 46.0 | 3.96e-01 | 100.0% | 57.0% |
| 4971866 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.55 | 48.0 | 4.06e-01 | 100.0% | 88.6% |
| 3510907 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.54 | 45.0 | 4.46e-01 | 100.0% | 92.0% |
| 5079369 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.54 | 38.0 | 3.18e-01 | 73.2% | 98.6% |
| 3222257 | 2484.1.1.109 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › bVLRF1 | 0.53 | 38.0 | 3.04e-01 | 74.4% | 98.1% |
| 3723320 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.53 | 46.0 | 4.09e-01 | 98.8% | 94.2% |
| 1007214 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.52 | 43.0 | 3.73e-01 | 97.6% | 84.4% |
| 3592277 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 37.0 | 2.86e-01 | 75.6% | 84.3% |
| 4970447 | 331.16.1.1 ↗ | a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 | 0.51 | 42.0 | 4.04e-01 | 96.3% | 97.0% |
| 3247634 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.51 | 39.0 | 3.45e-01 | 89.0% | 58.5% |