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IMGVR_UViG_3300026209_000432-3300026209-Ga0207989_10011079
Arc-VirIMGVR_UViG_3300026209_000432-3300026209-Ga0207989_10011079
Identity
- Kingdom:
- archaea
Quality
83.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 39-207
Domain cluster:
rep: NC_048048.2__YP_009810556.1__HOU03_gp342__00343__D60-228
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qq2B00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.78 | 73.0 | 6.32e-01 | 100.0% | 94.4% |
| 3dwoX00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.76 | 71.0 | 5.16e-01 | 100.0% | 98.4% |
| 2f1cX00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.76 | 69.0 | 5.99e-01 | 97.0% | 92.5% |
| 6wilA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.70 | 64.0 | 4.99e-01 | 98.2% | 99.1% |
| 5dl5A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.69 | 63.0 | 4.67e-01 | 97.6% | 92.3% |
| 3njtA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.69 | 63.0 | 5.11e-01 | 97.6% | 97.0% |
| 5dl7A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.67 | 60.0 | 4.54e-01 | 97.0% | 94.8% |
| 3sybA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.65 | 57.0 | 4.31e-01 | 95.3% | 87.5% |
| 2oojA00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.64 | 44.0 | 5.01e-01 | 88.8% | 90.8% |
| 3wjcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.64 | 49.0 | 5.10e-01 | 100.0% | 86.9% |
| 5fokA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.64 | 54.0 | 3.74e-01 | 89.3% | 51.3% |
| 3ia8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.62 | 49.0 | 5.05e-01 | 100.0% | 85.8% |
| 2hdiA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.62 | 52.0 | 3.74e-01 | 87.6% | 58.2% |
| 1kmoA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.62 | 52.0 | 3.65e-01 | 88.2% | 47.6% |
| 2porA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.60 | 55.0 | 4.47e-01 | 96.4% | 66.4% |
| 6fokB01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.60 | 53.0 | 3.58e-01 | 95.3% | 71.5% |
| 2q03A00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.60 | 44.0 | 4.90e-01 | 76.9% | 94.7% |
| 4aipC02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.60 | 52.0 | 3.58e-01 | 91.7% | 76.0% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 50.0 | 4.81e-01 | 89.3% | 93.7% |
| 1bh3A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.59 | 55.0 | 4.55e-01 | 100.0% | 64.0% |
| 4afkA00 | 2.40.160.100 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 52.0 | 3.93e-01 | 98.8% | 96.7% |
| 6r3wA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 48.0 | 4.91e-01 | 88.8% | 90.7% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.56 | 36.0 | 4.31e-01 | 88.2% | 97.2% |
| 2vdfA00 | 2.40.128.100 | Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin | 0.56 | 51.0 | 4.68e-01 | 100.0% | 96.4% |
| 2w16A03 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.56 | 47.0 | 3.28e-01 | 89.3% | 63.2% |
| 1bxwA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 43.0 | 4.31e-01 | 80.5% | 87.8% |
| 5jmfA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.55 | 43.0 | 3.72e-01 | 82.8% | 76.0% |
| 6oodA01 | 2.40.480.10 | Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like | 0.55 | 41.0 | 4.34e-01 | 76.9% | 98.0% |
| 4ae8D00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 39.0 | 3.95e-01 | 74.0% | 100.0% |
| 3blcA00 | 2.70.98.90 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 42.0 | 3.58e-01 | 84.0% | 80.7% |
| 1f49A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 42.0 | 3.51e-01 | 83.4% | 85.9% |
| 7dd9A02 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.52 | 40.0 | 3.51e-01 | 80.5% | 81.7% |
| 3rqbA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.51 | 41.0 | 3.55e-01 | 84.6% | 94.7% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3974567 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.83 | 78.0 | 6.55e-01 | 98.2% | 88.7% |
| 1298172 | 5084.5.1.8 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM | 0.82 | 76.0 | 7.58e-01 | 97.0% | 94.7% |
| 3968806 | 5084.5.1.68 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF27733 | 0.81 | 77.0 | 7.12e-01 | 100.0% | 98.1% |
| 4610039 | 5084.5.4.9 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › UPF0164 | 0.77 | 72.0 | 5.77e-01 | 100.0% | 92.1% |
| 4662377 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.77 | 73.0 | 5.89e-01 | 100.0% | 99.7% |
| 4882520 | 5084.1.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane | 0.75 | 68.0 | 6.68e-01 | 97.0% | 90.5% |
| 4528714 | 5084.5.4.9 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › UPF0164 | 0.74 | 69.0 | 5.35e-01 | 100.0% | 98.0% |
| 3970343 | 5084.5.1.24 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Gcw_chp | 0.74 | 69.0 | 6.34e-01 | 98.8% | 88.8% |
| 3981236 | 5084.5.4.6 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › TraF_2 | 0.74 | 69.0 | 5.69e-01 | 100.0% | 100.0% |
| 3514719 | 5084.5.4.6 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › TraF_2 | 0.74 | 69.0 | 5.28e-01 | 100.0% | 99.5% |
| 3941832 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.73 | 67.0 | 5.08e-01 | 98.2% | 98.9% |
| 139764 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.72 | 66.0 | 5.61e-01 | 100.0% | 90.4% |
| 4873102 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.70 | 53.0 | 5.96e-01 | 80.5% | 100.0% |
| 3405242 | 5084.5.1.37 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C | 0.70 | 64.0 | 6.20e-01 | 96.4% | 98.4% |
| 3385986 | 5084.3.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta | 0.70 | 62.0 | 5.84e-01 | 92.9% | 87.4% |
| 3761947 | 5084.5.1.33 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DNAJC11_beta-barrel | 0.70 | 59.0 | 4.86e-01 | 88.8% | 65.9% |
| 3574367 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.68 | 61.0 | 4.80e-01 | 95.3% | 96.5% |
| 3976237 | 5084.6.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Tsx-like channel › Tsx-like channel › Channel_Tsx | 0.68 | 61.0 | 5.55e-01 | 97.6% | 91.9% |
| 4315977 | 5084.5.1.37 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C | 0.68 | 61.0 | 5.19e-01 | 94.7% | 91.9% |
| 3968681 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.67 | 61.0 | 4.48e-01 | 97.0% | 89.5% |
| 3970069 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.67 | 60.0 | 4.52e-01 | 95.9% | 83.5% |
| 4008277 | 5084.5.1.62 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF27458 | 0.67 | 60.0 | 4.81e-01 | 95.9% | 90.6% |
| 4027955 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.67 | 59.0 | 4.59e-01 | 94.7% | 96.9% |
| 3699834 | 9.2.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin | 0.66 | 42.0 | 4.81e-01 | 100.0% | 85.6% |
| 3608121 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.66 | 57.0 | 4.81e-01 | 90.5% | 64.8% |
| 3944999 | 5084.8.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore | 0.66 | 55.0 | 4.03e-01 | 88.2% | 38.4% |
| 3966665 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.65 | 59.0 | 4.33e-01 | 97.0% | 90.6% |
| 3945644 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.65 | 61.0 | 4.38e-01 | 98.8% | 93.7% |
| 3508754 | 5084.5.1.33 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DNAJC11_beta-barrel | 0.65 | 57.0 | 5.00e-01 | 93.5% | 84.5% |
| 3941401 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.65 | 58.0 | 4.39e-01 | 96.4% | 79.5% |
| 3976823 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.64 | 60.0 | 4.34e-01 | 97.6% | 91.1% |
| 3706756 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.64 | 56.0 | 4.72e-01 | 93.5% | 86.2% |
| 4403655 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.64 | 59.0 | 4.28e-01 | 98.2% | 91.3% |
| 4472477 | 5084.5.1.35 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_2 | 0.63 | 57.0 | 4.59e-01 | 96.4% | 88.9% |
| 3743536 | 5084.5.1.33 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DNAJC11_beta-barrel | 0.63 | 56.0 | 4.81e-01 | 95.9% | 88.3% |
| 4417314 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.63 | 52.0 | 3.59e-01 | 87.6% | 53.2% |
| 4646283 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.63 | 58.0 | 4.16e-01 | 97.6% | 93.9% |
| 3506925 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.62 | 52.0 | 5.14e-01 | 88.8% | 92.7% |
| 3942540 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.62 | 52.0 | 3.74e-01 | 88.8% | 47.4% |
| 4971555 | 9.13.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3224 | 0.62 | 46.0 | 4.97e-01 | 90.5% | 90.3% |
| 3946102 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.61 | 57.0 | 4.15e-01 | 97.6% | 92.6% |
| 3595544 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.61 | 53.0 | 4.41e-01 | 92.3% | 83.0% |
| 4066987 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.60 | 50.0 | 3.45e-01 | 87.6% | 46.8% |
| 4100381 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.60 | 52.0 | 3.66e-01 | 91.7% | 47.5% |
| None | — | 0.60 | 51.0 | 3.59e-01 | 90.5% | 52.0% | |
| 3945018 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.60 | 53.0 | 4.05e-01 | 96.4% | 96.2% |
| 4261427 | 5084.10.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD,LptD_2 | 0.59 | 50.0 | 3.41e-01 | 89.9% | 51.5% |
| 3974176 | 5084.8.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore | 0.59 | 54.0 | 3.86e-01 | 96.4% | 84.4% |
| 4269370 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.59 | 50.0 | 3.40e-01 | 90.5% | 51.9% |
| 4285799 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.56 | 48.0 | 3.32e-01 | 91.1% | 58.6% |
| 3409721 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.56 | 48.0 | 4.00e-01 | 92.3% | 71.2% |
| 3574513 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.55 | 43.0 | 4.13e-01 | 87.6% | 70.3% |
| 4531587 | 5084.1.1.35 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Surface_Ag_2 | 0.53 | 44.0 | 3.96e-01 | 86.4% | 87.6% |
| 4046236 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.52 | 46.0 | 3.22e-01 | 96.4% | 76.5% |
| 3970697 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.51 | 42.0 | 3.90e-01 | 87.0% | 91.6% |