IMGVR_UViG_3300026212_000163-3300026212-Ga0208409_10047674

Arc-Vir

Identity

87.0 mean pLDDT

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 323-461

PDB

Domain cluster: rep: JBCH_GD18_scaffold_652796_prodigal-single.1__X__X__00390__D477-590

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4n2kA01	2.60.40.1860	Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, N-terminal domain	0.52	36.0	3.83e-01	70.5%	95.0%
2y24A01	2.60.40.1180	Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II	0.50	36.0	4.02e-01	83.5%	99.1%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4026220	3156.3.1.0 ↗	beta sandwiches › Cupredoxin-like › Surface antigen 1 (SAG1)-related-sequence (SRS) family › Surface antigen 1 (SAG1)-related-sequence (SRS) family	0.52	35.0	4.00e-01	90.6%	95.0%
4204147	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.51	34.0	3.78e-01	88.5%	88.6%

D2 medium residues 1-54

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07880.17 best	T4_gp9_10_N	30.8	4.10e-07	96.3%	29.1%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1zchA00	3.40.109.10	Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase	0.69	52.0	3.31e-01	94.4%	17.3%
3ppuB02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.67	48.0	3.72e-01	92.6%	36.3%
3behB01	1.20.120.540	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels	0.62	47.0	3.72e-01	85.2%	42.7%
2ycdA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.61	48.0	3.75e-01	92.6%	39.3%
7nc3F01	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.60	50.0	3.90e-01	92.6%	73.7%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3779468	108.1.1.73 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7	0.63	45.0	3.80e-01	72.2%	95.6%
3787837	102.1.1.0 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like	0.60	52.0	3.47e-01	96.3%	29.5%
3291436	304.113.1.1 ↗	a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain › GATase_2	0.56	49.0	3.77e-01	100.0%	60.8%