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IMGVR_UViG_3300026250_000158-3300026250-Ga0209612_100244924

Arc-Vir

IMGVR_UViG_3300026250_000158-3300026250-Ga0209612_100244924

Quality

93.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-86
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a8eA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.77 65.0 6.47e-01 91.7% 87.4%
2a3vB01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.76 66.0 6.33e-01 92.9% 89.4%
1a0pA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.76 67.0 6.55e-01 96.4% 89.0%
3f4mA00 1.20.1440.160 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like 0.72 63.0 5.16e-01 96.4% 90.3%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 53.0 4.95e-01 78.6% 96.1%
1aisB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 51.0 4.82e-01 75.0% 98.0%
2ivxB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 49.0 4.43e-01 72.6% 88.7%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 49.0 4.74e-01 75.0% 97.9%
3sqiA01 1.10.150.540 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.69 57.0 5.43e-01 89.3% 76.8%
3h4cA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 48.0 4.64e-01 73.8% 97.9%
1xo0A01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.68 56.0 5.12e-01 89.3% 73.0%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 48.0 4.70e-01 75.0% 97.9%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 50.0 4.28e-01 77.4% 84.8%
1yhlA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.66 56.0 3.74e-01 96.4% 37.8%
6tmfT00 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.66 46.0 5.15e-01 72.6% 98.4%
1zp2A01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 46.0 4.19e-01 73.8% 77.4%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 48.0 4.37e-01 77.4% 92.9%
2f2cA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 48.0 4.41e-01 78.6% 89.9%
2w96A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 47.0 4.30e-01 78.6% 89.4%
2xzmV01 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.64 44.0 4.99e-01 77.4% 100.0%
1tj7A03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.62 45.0 4.77e-01 95.2% 90.1%
2kp7A01 1.10.150.110 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like 0.62 46.0 4.89e-01 98.8% 91.9%
1n5uA04 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.61 46.0 4.65e-01 86.9% 79.1%
3d1uA03 1.20.1270.240 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.60 44.0 4.13e-01 96.4% 63.4%
2gl5A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 52.0 4.53e-01 100.0% 88.0%
2r7hB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 52.0 4.25e-01 97.6% 56.6%
6ig5A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.58 51.0 4.41e-01 100.0% 73.9%
2cruA01 1.10.8.140 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain 0.58 37.0 3.84e-01 86.9% 68.8%
3nz4B03 1.10.274.20 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 0.58 52.0 4.82e-01 97.6% 87.5%
4xcgA02 3.30.260.10 Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain 0.58 50.0 4.57e-01 97.6% 97.3%
6ks6a01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.58 50.0 3.53e-01 98.8% 91.3%
4mn0A00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 50.0 3.97e-01 98.8% 66.3%
1td6A03 1.10.472.40 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3 0.57 40.0 3.97e-01 75.0% 89.1%
5x9vA01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.57 49.0 3.59e-01 98.8% 98.8%
1tj7A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.56 49.0 4.58e-01 97.6% 78.1%
3mesA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.56 48.0 3.39e-01 97.6% 85.0%
2n7zA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.56 41.0 3.81e-01 100.0% 61.3%
6rxaA01 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.56 45.0 4.48e-01 97.6% 86.2%
1zylA03 1.20.1270.170 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.56 42.0 3.99e-01 95.2% 67.0%
2e9fB01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.56 48.0 4.60e-01 97.6% 84.4%
2scpA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 47.0 3.81e-01 97.6% 65.5%
2mx8A01 1.10.274.70 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain 0.55 49.0 4.45e-01 98.8% 78.8%
2qdjA03 1.10.472.140 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.55 49.0 4.38e-01 97.6% 75.0%
6zhiB02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.54 41.0 4.14e-01 92.9% 80.7%
2hujA00 1.20.120.440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like 0.53 46.0 4.11e-01 98.8% 84.0%
2iw3A02 1.20.1390.20 Mainly Alpha › Up-down Bundle › PWI domain › 0.53 44.0 4.33e-01 98.8% 87.8%
3f5cB00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.53 46.0 3.66e-01 100.0% 59.0%
5figA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.53 42.0 4.03e-01 88.1% 98.0%
1un8A02 1.25.40.340 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DhaL domain 0.52 45.0 3.57e-01 100.0% 93.8%
1yfmA01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.52 44.0 3.95e-01 97.6% 70.6%
1x9fC00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 43.0 3.72e-01 100.0% 74.5%
2mqaA00 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.51 46.0 4.00e-01 100.0% 80.0%
1vluA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.51 37.0 2.68e-01 78.6% 80.1%
1x4oA00 1.10.10.790 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module 0.50 36.0 3.72e-01 76.2% 87.2%
3kavA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.50 43.0 4.06e-01 96.4% 82.4%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4992938 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.82 69.0 6.76e-01 95.2% 82.2%
4959578 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.82 71.0 6.84e-01 92.9% 84.2%
4960056 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.81 72.0 6.91e-01 96.4% 91.6%
4579981 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.80 72.0 6.50e-01 96.4% 80.0%
4160987 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.78 68.0 6.19e-01 95.2% 80.0%
4168571 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.78 68.0 6.20e-01 95.2% 80.9%
4142699 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.78 69.0 6.48e-01 96.4% 85.0%
4130034 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.77 68.0 6.17e-01 95.2% 80.0%
4216298 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.77 69.0 6.48e-01 96.4% 85.0%
4578262 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.77 66.0 6.14e-01 94.0% 74.3%
4063794 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.77 67.0 6.11e-01 95.2% 79.1%
4069480 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.77 68.0 6.20e-01 96.4% 80.9%
4140783 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.77 68.0 6.42e-01 96.4% 87.0%
3969537 186.1.1.0 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.75 65.0 6.17e-01 95.2% 88.0%
4994276 186.1.1.4 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.75 64.0 6.26e-01 91.7% 85.6%
4948421 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.73 54.0 4.87e-01 78.6% 93.9%
5045083 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.72 53.0 4.07e-01 77.4% 58.4%
4927193 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.71 49.0 4.56e-01 71.4% 89.5%
5026540 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.71 52.0 4.87e-01 78.6% 93.3%
4030134 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.70 52.0 4.41e-01 77.4% 72.6%
3890040 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.70 51.0 4.26e-01 76.2% 67.9%
3649888 632.2.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.69 39.0 4.28e-01 95.2% 67.1%
2841 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.68 51.0 4.37e-01 79.8% 77.3%
5000181 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.66 47.0 4.36e-01 76.2% 86.4%
4006612 639.2.1.1 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB 0.63 53.0 5.28e-01 91.7% 90.6%
4374787 131.1.1.15 alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III 0.63 54.0 4.17e-01 97.6% 75.3%
3620214 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.61 47.0 4.51e-01 96.4% 72.6%
4003844 148.1.3.22 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_5 0.61 46.0 4.21e-01 79.8% 85.5%
3542152 397.7.1.7 few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 › BSMAP 0.60 54.0 5.28e-01 98.8% 97.8%
3784411 181.1.1.0 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.59 39.0 4.04e-01 97.6% 71.2%
3614644 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.59 52.0 4.78e-01 96.4% 75.5%
5053357 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.59 50.0 4.09e-01 97.6% 51.3%
5071262 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 53.0 3.42e-01 100.0% 33.8%
4488173 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 45.0 4.48e-01 94.0% 80.0%
5000894 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.58 51.0 3.34e-01 100.0% 33.9%
5005238 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.58 52.0 3.31e-01 100.0% 31.9%
4933448 4953.1.1.4 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.58 45.0 4.57e-01 96.4% 83.5%
3455582 4952.1.1.0 alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.58 47.0 4.38e-01 98.8% 70.0%
5060987 5048.1.1.1 alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like › MIP 0.58 48.0 3.84e-01 95.2% 69.2%
5053821 4953.1.1.0 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.57 51.0 4.83e-01 97.6% 86.0%
3293516 4953.1.1.23 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › YIF1 0.57 51.0 3.85e-01 100.0% 72.0%
3495911 188.1.1.0 alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain 0.56 49.0 3.73e-01 100.0% 67.0%
4169057 4952.1.1.0 alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.56 47.0 4.55e-01 92.9% 84.2%
4955902 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.56 50.0 3.29e-01 100.0% 35.6%
5035887 102.3.1.0 alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain 0.55 44.0 4.48e-01 97.6% 90.6%
4630813 4952.1.1.0 alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.55 47.0 4.37e-01 100.0% 74.5%
4031489 632.19.1.3 alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 0.55 43.0 4.56e-01 92.9% 94.7%
4662588 4952.1.1.0 alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.55 46.0 4.37e-01 97.6% 77.1%
4269573 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.54 39.0 3.77e-01 79.8% 65.3%
3810077 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.54 47.0 3.93e-01 98.8% 68.4%
5014267 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.54 38.0 4.04e-01 92.9% 87.1%
3574560 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.53 45.0 4.41e-01 98.8% 88.9%
3413892 632.19.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A 0.53 41.0 3.71e-01 84.5% 75.0%
3894015 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.53 40.0 3.92e-01 83.3% 100.0%
4010554 5001.1.1.38 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › MASE4 0.52 43.0 3.11e-01 89.3% 37.5%
3291137 7002.1.1.8 alpha duplicates or obligate multimers › TM trimerization region of envelope glycoprotein B › TM trimerization region of envelope glycoprotein B › TM trimerization region of envelope glycoprotein B › DUF1206 0.52 41.0 3.39e-01 89.3% 63.6%
4542753 2004.1.1.221 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG 0.51 44.0 2.81e-01 100.0% 32.6%
3521510 192.7.1.73 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › PF31020 0.51 43.0 4.06e-01 100.0% 87.3%
4929723 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.51 44.0 3.65e-01 100.0% 71.0%
3511947 2004.1.1.221 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG 0.50 42.0 2.78e-01 98.8% 23.8%
3402200 196.1.1.0 alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS 0.50 44.0 3.81e-01 100.0% 84.4%