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IMGVR_UViG_3300026255_000010-3300026255-Ga0209613_100046825
Arc-VirIMGVR_UViG_3300026255_000010-3300026255-Ga0209613_100046825
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-159
Domain cluster:
rep: IMGVR_UViG_3300025631_000951-3300025631-Ga0209204_100330714__D33-206
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lurA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.63 | 44.0 | 3.48e-01 | 72.4% | 99.7% |
| 5dl7A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.61 | 53.0 | 3.85e-01 | 91.7% | 46.3% |
| 5dl8A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.60 | 52.0 | 3.85e-01 | 91.7% | 43.7% |
| 4fuvA00 | 2.40.160.170 | Mainly Beta › Beta Barrel › Porin › | 0.60 | 50.0 | 4.48e-01 | 87.8% | 86.4% |
| 4c00A04 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.58 | 54.0 | 4.19e-01 | 97.4% | 57.3% |
| 3sy9C01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.57 | 51.0 | 3.92e-01 | 99.4% | 43.3% |
| 7x7zA01 | 2.40.480.10 | Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like | 0.56 | 38.0 | 4.01e-01 | 87.8% | 77.0% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 28.0 | 3.85e-01 | 74.4% | 100.0% |
| 4bumX00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.55 | 43.0 | 3.50e-01 | 95.5% | 45.6% |
| 4aipC02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.55 | 52.0 | 3.43e-01 | 100.0% | 30.1% |
| 2vckA00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.54 | 42.0 | 3.78e-01 | 93.6% | 60.1% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.54 | 33.0 | 3.81e-01 | 89.1% | 83.2% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 38.0 | 3.98e-01 | 72.4% | 88.2% |
| 2porA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.54 | 48.0 | 3.81e-01 | 94.9% | 56.1% |
| 2zylA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.53 | 39.0 | 3.48e-01 | 91.7% | 54.4% |
| 1v7wA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.53 | 49.0 | 3.89e-01 | 100.0% | 90.1% |
| 3a0oA03 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 46.0 | 3.79e-01 | 94.9% | 69.0% |
| 1n9eA01 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.51 | 45.0 | 3.18e-01 | 96.2% | 70.8% |
| 3k25A00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 44.0 | 3.61e-01 | 92.9% | 83.3% |
| 3qlbA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.51 | 46.0 | 3.15e-01 | 98.1% | 39.4% |
| 4meeA00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.50 | 45.0 | 3.55e-01 | 94.2% | 58.4% |
| 4e1sA00 | 2.40.160.160 | Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain | 0.50 | 44.0 | 3.82e-01 | 94.2% | 68.2% |
| 3imhA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.50 | 46.0 | 3.60e-01 | 100.0% | 77.1% |
| 3fidA00 | 2.40.128.140 | Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein | 0.50 | 44.0 | 3.53e-01 | 93.6% | 81.1% |
| 1bh3A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.50 | 45.0 | 3.64e-01 | 96.2% | 61.6% |
| 7wffb01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.50 | 46.0 | 3.68e-01 | 100.0% | 82.8% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030498 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.62 | 42.0 | 4.30e-01 | 100.0% | 70.7% |
| 3983528 | 5084.3.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta | 0.57 | 41.0 | 3.55e-01 | 90.4% | 47.2% |
| 4522038 | 11.1.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M | 0.57 | 29.0 | 3.39e-01 | 72.4% | 67.3% |
| 4958029 | 12.3.1.75 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GDE_N_bis | 0.56 | 42.0 | 3.70e-01 | 76.9% | 72.7% |
| 3965256 | 5084.5.1.39 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF27051 | 0.56 | 47.0 | 3.61e-01 | 98.1% | 40.9% |
| 4880357 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.55 | 39.0 | 4.19e-01 | 93.6% | 82.8% |
| 4109711 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.55 | 45.0 | 3.77e-01 | 87.2% | 93.0% |
| 3921483 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.55 | 44.0 | 3.52e-01 | 98.1% | 44.1% |
| 5035808 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.55 | 48.0 | 3.28e-01 | 94.9% | 85.9% |
| 4102065 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.54 | 47.0 | 3.90e-01 | 94.2% | 75.3% |
| 888 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.54 | 48.0 | 3.81e-01 | 94.9% | 56.1% |
| 3913260 | 5087.1.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › Vit_b-sht_shell | 0.53 | 39.0 | 3.61e-01 | 99.4% | 61.1% |
| 3915023 | 243.3.1.1 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin | 0.53 | 41.0 | 4.40e-01 | 82.1% | 93.3% |
| 3236032 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.53 | 50.0 | 3.31e-01 | 100.0% | 43.6% |
| 4066147 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.53 | 49.0 | 3.72e-01 | 99.4% | 45.9% |
| 3589839 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.52 | 44.0 | 3.46e-01 | 92.3% | 78.8% |
| 3516401 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.52 | 42.0 | 3.09e-01 | 84.0% | 53.1% |
| 3978431 | 5084.3.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta | 0.51 | 44.0 | 3.77e-01 | 91.7% | 58.4% |
| 136690 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.51 | 44.0 | 3.61e-01 | 92.9% | 83.0% |
| 2034 | 12.3.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid | 0.51 | 45.0 | 3.24e-01 | 96.2% | 77.4% |
| 139979 | 5084.2.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPT-like › OMPT-like › Omptin | 0.51 | 43.0 | 3.48e-01 | 89.7% | 59.1% |
| 4156637 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.51 | 45.0 | 3.83e-01 | 98.7% | 96.6% |
| 185095 | 6057.1.1.1 ↗ | beta sandwiches › Uncharacterized protein BAS0735 › Uncharacterized protein BAS0735 › Uncharacterized protein BAS0735 › DUF3238 | 0.50 | 41.0 | 3.78e-01 | 84.6% | 74.7% |
| 136071 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.50 | 46.0 | 3.62e-01 | 100.0% | 78.3% |
| 3668294 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.50 | 44.0 | 3.64e-01 | 94.2% | 82.2% |
| 4031020 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.50 | 42.0 | 3.35e-01 | 91.0% | 81.5% |