IMGVR_UViG_3300026255_000127-3300026255-Ga0209613_101060810

Arc-Vir

Identity

91.1 mean pLDDT

View cluster (3 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-74

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6xgqb01	2.40.300.10	Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D	0.82	67.0	6.03e-01	94.4%	65.6%
1c5eA00	2.40.300.10	Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D	0.78	62.0	5.62e-01	97.2%	64.2%
1g8lA04	2.40.340.10	Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV	0.61	50.0	4.97e-01	93.0%	100.0%
1a1rA02	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.55	39.0	3.75e-01	84.5%	63.5%
1ileA02	3.90.740.10	Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	0.54	40.0	3.01e-01	81.7%	47.2%
2lp6A00	2.40.10.190	Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4	0.53	40.0	3.69e-01	95.8%	63.7%
2piaA01	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.52	38.0	3.42e-01	97.2%	53.8%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2640772	70.4.1.1 ↗	beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › HDPD	0.81	68.0	5.95e-01	97.2%	63.0%
5002645	70.4.1.0 ↗	beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D)	0.78	60.0	6.55e-01	93.0%	98.3%
4602455	70.1.1.1 ↗	beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C	0.64	54.0	5.40e-01	94.4%	100.0%
3936130	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.57	33.0	3.00e-01	73.2%	41.1%
4679376	377.1.1.11 ↗	few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C	0.55	45.0	3.61e-01	91.5%	52.7%
4990285	1.1.8.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain	0.55	39.0	3.64e-01	95.8%	59.6%
3272363	4.1.1.219 ↗	beta barrels › SH3 › SH3 › SH3 › LSM12_LSM	0.54	31.0	2.90e-01	74.6%	42.1%
3993184	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.53	40.0	3.48e-01	97.2%	50.8%
3624912	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.51	35.0	3.15e-01	71.8%	64.0%

D2 medium residues 75-129

PDB

Domain cluster: rep: S2_009_000_R2_scaffold_40_prodigal-single.1__X__X__00206__D195-250

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3sy6A02	2.60.40.2630	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.55	39.0	3.07e-01	80.0%	60.9%
4n4iA02	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.53	37.0	3.20e-01	74.5%	90.0%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3969204	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.58	42.0	3.85e-01	96.4%	57.3%
1178920	11.1.4.22 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Mfa_like_1	0.55	39.0	3.07e-01	80.0%	60.9%
4618103	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.54	40.0	3.94e-01	96.4%	75.0%
3506279	4.1.1.112 ↗	beta barrels › SH3 › SH3 › SH3 › Tudor_1_RapA	0.53	34.0	3.45e-01	83.6%	65.5%
2556060	1.1.7.17 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N	0.51	38.0	3.52e-01	100.0%	61.5%
5037487	12.1.1.0 ↗	beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain	0.51	34.0	3.36e-01	96.4%	63.1%