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IMGVR_UViG_3300026261_000048-3300026261-Ga0208524_10037846
Arc-VirIMGVR_UViG_3300026261_000048-3300026261-Ga0208524_10037846
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-26_83-103_131-142
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pkhB00 | 2.70.40.10 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) | 0.86 | 78.0 | 5.49e-01 | 100.0% | 97.7% |
| 2wnyA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.51 | 44.0 | 3.40e-01 | 100.0% | 83.9% |
| 2ogkD00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.50 | 43.0 | 3.32e-01 | 100.0% | 83.8% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4986703 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.51 | 45.0 | 3.44e-01 | 100.0% | 92.1% |
| 4930968 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.51 | 45.0 | 3.42e-01 | 100.0% | 86.4% |
| 4943808 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.51 | 44.0 | 3.33e-01 | 100.0% | 83.3% |
| 5070035 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.50 | 43.0 | 3.33e-01 | 100.0% | 90.3% |
D2
medium
residues 27-82_104-130
Domain cluster:
rep: IMGVR_UViG_3300046050_000037-3300046050-Ga0496843_02818_1770_2303__D41-150
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5042019 | 70.2.1.5 ↗ | beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD | 0.90 | 85.0 | 6.57e-01 | 100.0% | 63.6% |
| 4997594 | 70.2.1.5 ↗ | beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD | 0.90 | 85.0 | 6.57e-01 | 100.0% | 64.0% |
| 4041362 | 70.2.1.5 ↗ | beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD | 0.90 | 84.0 | 6.60e-01 | 100.0% | 64.8% |
| None | — | 0.89 | 83.0 | 6.41e-01 | 100.0% | 62.4% | |
| 5073212 | 70.2.1.5 ↗ | beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD | 0.88 | 82.0 | 6.42e-01 | 100.0% | 64.2% |
| 5002855 | 70.2.1.5 ↗ | beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD | 0.88 | 82.0 | 6.31e-01 | 100.0% | 61.3% |
| 5022441 | 70.2.1.5 ↗ | beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD | 0.87 | 82.0 | 6.49e-01 | 100.0% | 68.2% |
| 3626865 | 2.1.1.49 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MRP-S35 | 0.64 | 31.0 | 2.64e-01 | 100.0% | 28.5% |
| 3427504 | 4.1.1.150 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3123 | 0.55 | 30.0 | 3.17e-01 | 97.6% | 58.6% |
| 4073433 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.54 | 33.0 | 3.39e-01 | 100.0% | 62.5% |