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IMGVR_UViG_3300026261_000079-3300026261-Ga0208524_10053941
Arc-VirIMGVR_UViG_3300026261_000079-3300026261-Ga0208524_10053941
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-60
Domain cluster:
representative
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e8oD00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.69 | 45.0 | 4.08e-01 | 70.9% | 48.7% |
| 6c98A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 48.0 | 4.06e-01 | 76.4% | 78.0% |
| 5jowA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 45.0 | 3.07e-01 | 96.4% | 19.5% |
| 2khxA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.66 | 47.0 | 4.17e-01 | 74.5% | 60.8% |
| 2o62A02 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.66 | 46.0 | 3.41e-01 | 72.7% | 29.2% |
| 4fdtB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.65 | 52.0 | 3.11e-01 | 87.3% | 94.2% |
| 8b0qA01 | 3.30.420.340 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › UvrC, RNAse H endonuclease domain | 0.65 | 48.0 | 3.39e-01 | 80.0% | 39.2% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.64 | 45.0 | 3.78e-01 | 72.7% | 45.7% |
| 2l2mA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.64 | 46.0 | 4.26e-01 | 76.4% | 64.3% |
| 3s5tA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.63 | 45.0 | 3.29e-01 | 76.4% | 34.0% |
| 3o0lA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 44.0 | 3.58e-01 | 74.5% | 71.6% |
| 3ld7A00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.63 | 39.0 | 3.41e-01 | 76.4% | 39.1% |
| 2vzsA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 41.0 | 3.45e-01 | 70.9% | 75.2% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.60 | 42.0 | 3.42e-01 | 72.7% | 44.0% |
| 3cygA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.60 | 42.0 | 3.34e-01 | 74.5% | 41.2% |
| 3zleA03 | 2.10.70.70 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.59 | 40.0 | 4.46e-01 | 94.5% | 100.0% |
| 3n54B01 | 6.20.190.10 | Special › Other non-globular › Nuclear Transport Factor 2; Chain: A, › Nutrient germinant receptor protein C, domain 1 | 0.59 | 52.0 | 5.03e-01 | 100.0% | 90.2% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.58 | 42.0 | 4.45e-01 | 92.7% | 87.5% |
| 2ml5A00 | 3.10.450.410 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 40.0 | 2.95e-01 | 72.7% | 27.7% |
| 5jenA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.58 | 42.0 | 3.42e-01 | 78.2% | 85.6% |
| 1xzpB00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.58 | 40.0 | 3.12e-01 | 74.5% | 69.5% |
| 2cxhA01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.58 | 50.0 | 3.49e-01 | 96.4% | 43.7% |
| 4ztkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.57 | 50.0 | 3.24e-01 | 100.0% | 89.2% |
| 5jmfA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.57 | 46.0 | 2.95e-01 | 89.1% | 76.8% |
| 2fauA02 | 2.60.40.640 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 40.0 | 3.06e-01 | 76.4% | 32.1% |
| 1e5bA00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 38.0 | 3.34e-01 | 70.9% | 87.4% |
| 4bfkA00 | 2.60.40.730 | Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain | 0.56 | 41.0 | 3.22e-01 | 80.0% | 72.6% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.56 | 46.0 | 3.45e-01 | 96.4% | 53.0% |
| 4r3aA02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.56 | 44.0 | 3.31e-01 | 87.3% | 57.0% |
| 5n1tA03 | 3.90.760.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain | 0.56 | 38.0 | 3.60e-01 | 72.7% | 78.9% |
| 2nn6E00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.55 | 46.0 | 2.93e-01 | 92.7% | 44.7% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 46.0 | 3.95e-01 | 92.7% | 91.1% |
| 8dkrB01 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.55 | 47.0 | 3.14e-01 | 98.2% | 23.6% |
| 3blcA00 | 2.70.98.90 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 43.0 | 2.82e-01 | 89.1% | 80.4% |
| 3vrdB03 | 3.90.760.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain | 0.54 | 37.0 | 3.47e-01 | 72.7% | 79.7% |
| 4mjgA00 | 3.30.2030.30 | Alpha Beta › 2-Layer Sandwich › TBP-like › | 0.53 | 43.0 | 3.21e-01 | 100.0% | 65.5% |
| 2essA02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 46.0 | 3.87e-01 | 100.0% | 74.7% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.53 | 36.0 | 3.81e-01 | 72.7% | 100.0% |
| 1pzdA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.53 | 42.0 | 3.42e-01 | 92.7% | 65.2% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 40.0 | 3.11e-01 | 83.6% | 69.2% |
| 3tw8A01 | 3.30.450.200 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module | 0.52 | 44.0 | 3.29e-01 | 96.4% | 57.2% |
| 1stzA03 | 3.30.390.60 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Heat-inducible transcription repressor hrca homolog; domain 3 | 0.51 | 46.0 | 3.90e-01 | 100.0% | 85.4% |
| 5ighA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 35.0 | 3.06e-01 | 92.7% | 45.5% |
| 3akoC00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.51 | 41.0 | 3.08e-01 | 92.7% | 74.5% |
| 4ifdE00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.51 | 41.0 | 2.78e-01 | 100.0% | 68.2% |
| 3blzA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 39.0 | 3.10e-01 | 87.3% | 71.0% |
| 1e5tA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 38.0 | 2.41e-01 | 85.5% | 76.8% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.50 | 39.0 | 2.58e-01 | 89.1% | 20.4% |
| 3iupA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.50 | 36.0 | 2.58e-01 | 78.2% | 39.9% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3702115 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.76 | 51.0 | 3.29e-01 | 70.9% | 20.4% |
| 3610755 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.75 | 52.0 | 4.04e-01 | 72.7% | 43.5% |
| 3930372 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.75 | 51.0 | 4.06e-01 | 70.9% | 79.0% |
| 3263815 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.73 | 49.0 | 4.20e-01 | 70.9% | 53.3% |
| 3788141 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.71 | 48.0 | 4.35e-01 | 72.7% | 52.0% |
| 3933100 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.71 | 45.0 | 4.16e-01 | 72.7% | 50.0% |
| 3925738 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.70 | 48.0 | 3.80e-01 | 74.5% | 36.4% |
| 4042246 | 247.1.1.17 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › ODP | 0.69 | 49.0 | 3.13e-01 | 76.4% | 29.2% |
| 4944220 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.68 | 46.0 | 2.87e-01 | 70.9% | 22.1% |
| 3514660 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.67 | 46.0 | 3.94e-01 | 74.5% | 43.3% |
| 5004195 | 10.1.1.64 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF2341 | 0.67 | 53.0 | 3.39e-01 | 96.4% | 17.5% |
| 3893915 | 330.1.1.3 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer | 0.67 | 48.0 | 3.67e-01 | 76.4% | 39.2% |
| 3658323 | 284.1.2.1 ↗ | a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases › OSR1_C | 0.66 | 45.0 | 3.64e-01 | 70.9% | 41.0% |
| 4371406 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.66 | 51.0 | 3.54e-01 | 83.6% | 41.1% |
| 3690953 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.66 | 55.0 | 4.61e-01 | 100.0% | 63.1% |
| 3683663 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.66 | 55.0 | 3.54e-01 | 100.0% | 19.3% |
| 3994059 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.65 | 49.0 | 4.42e-01 | 96.4% | 58.7% |
| 3730653 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.65 | 44.0 | 4.11e-01 | 70.9% | 55.7% |
| 3173222 | 4075.1.1.0 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain | 0.65 | 44.0 | 3.47e-01 | 70.9% | 38.3% |
| 4421418 | 330.1.1.3 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer | 0.64 | 46.0 | 3.63e-01 | 76.4% | 44.3% |
| 1156585 | 5092.1.1.4 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP | 0.63 | 44.0 | 3.50e-01 | 72.7% | 87.6% |
| 3439646 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.63 | 43.0 | 3.52e-01 | 70.9% | 41.0% |
| 3592742 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.63 | 51.0 | 4.33e-01 | 94.5% | 54.4% |
| 3197023 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.63 | 48.0 | 2.92e-01 | 85.5% | 22.6% |
| 3846927 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 54.0 | 4.47e-01 | 96.4% | 64.2% |
| 4299577 | 3121.1.1.15 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › FabA | 0.62 | 46.0 | 4.31e-01 | 96.4% | 64.3% |
| 3596021 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 43.0 | 2.61e-01 | 76.4% | 19.5% |
| 4614038 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.61 | 43.0 | 3.30e-01 | 74.5% | 41.4% |
| 4029617 | 5.1.11.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DUF7899 | 0.61 | 45.0 | 2.66e-01 | 80.0% | 34.6% |
| 4010978 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 43.0 | 3.52e-01 | 74.5% | 54.5% |
| 3813186 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 46.0 | 2.70e-01 | 81.8% | 41.8% |
| 3368394 | 4325.1.1.11 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › PF27041 | 0.61 | 54.0 | 4.50e-01 | 100.0% | 60.0% |
| 4975052 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.60 | 42.0 | 3.27e-01 | 74.5% | 40.8% |
| 3537930 | 244.2.1.12 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › CFAP61_dimer | 0.60 | 44.0 | 3.07e-01 | 81.8% | 39.0% |
| 4037556 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.60 | 48.0 | 3.65e-01 | 90.9% | 55.0% |
| 4121071 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.59 | 43.0 | 3.10e-01 | 80.0% | 32.6% |
| 4583631 | 80.1.1.1 ↗ | beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn | 0.59 | 46.0 | 3.83e-01 | 92.7% | 90.9% |
| 3879550 | 244.2.1.12 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › CFAP61_dimer | 0.59 | 43.0 | 3.37e-01 | 81.8% | 60.8% |
| 3408937 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.59 | 39.0 | 3.54e-01 | 72.7% | 47.5% |
| 4011809 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.58 | 40.0 | 2.40e-01 | 72.7% | 67.3% |
| 3739414 | 330.1.1.3 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer | 0.58 | 41.0 | 3.40e-01 | 76.4% | 45.7% |
| 3957265 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.58 | 44.0 | 4.02e-01 | 96.4% | 61.3% |
| 4889524 | 222.1.1.29 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl_transf_1, MaoC_dehydratas | 0.58 | 50.0 | 3.77e-01 | 98.2% | 62.2% |
| 3700143 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.57 | 41.0 | 2.94e-01 | 76.4% | 30.0% |
| 3652551 | 10.1.1.8 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY | 0.57 | 51.0 | 3.72e-01 | 100.0% | 40.0% |
| 2650968 | 11.46.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C-domain of Mg adhesin P110 › C-domain of Mg adhesin P110 › MGP3_C | 0.57 | 48.0 | 3.74e-01 | 98.2% | 92.8% |
| 1290638 | 3392.1.1.1 ↗ | a+b two layers › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › PAP_PilO | 0.56 | 47.0 | 3.29e-01 | 98.2% | 56.7% |
| 4070998 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.56 | 40.0 | 2.85e-01 | 85.5% | 23.2% |
| 3998766 | 3775.1.1.1 ↗ | beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 | 0.55 | 38.0 | 2.39e-01 | 74.5% | 36.3% |
| 3221077 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.55 | 44.0 | 4.00e-01 | 92.7% | 77.5% |
| 3577311 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.55 | 46.0 | 3.84e-01 | 96.4% | 61.0% |
| 3642693 | 101.11.1.7 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › RNase_PH | 0.55 | 38.0 | 3.31e-01 | 74.5% | 45.6% |
| 3866741 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 3.68e-01 | 90.9% | 99.0% |
| 4935679 | 3414.1.1.13 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 | 0.54 | 37.0 | 3.28e-01 | 74.5% | 50.0% |
| 3431175 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 44.0 | 3.73e-01 | 100.0% | 52.0% |
| 3370322 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.53 | 40.0 | 3.55e-01 | 87.3% | 58.9% |
| 3227424 | 331.18.1.8 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › BBS7_pf | 0.53 | 44.0 | 3.57e-01 | 92.7% | 55.2% |
| 3216768 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 40.0 | 3.38e-01 | 87.3% | 53.3% |
| 222581 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.52 | 42.0 | 3.08e-01 | 98.2% | 100.0% |
| 3599659 | 206.1.3.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DUF7920 | 0.52 | 44.0 | 2.65e-01 | 96.4% | 16.2% |
| 3187356 | 2484.1.1.223 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27036 | 0.52 | 45.0 | 3.13e-01 | 100.0% | 38.9% |
| 3992138 | 11.2.1.52 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_nem | 0.52 | 35.0 | 2.54e-01 | 70.9% | 94.0% |
| 4972821 | 523.1.1.3 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › PF29994 | 0.52 | 45.0 | 3.51e-01 | 98.2% | 87.5% |
| 3593291 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 44.0 | 3.25e-01 | 96.4% | 57.9% |
| 4023351 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.51 | 43.0 | 3.18e-01 | 96.4% | 94.4% |
| 3722450 | 223.2.1.10 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA | 0.50 | 44.0 | 3.24e-01 | 98.2% | 59.3% |
| 3173528 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.50 | 42.0 | 2.58e-01 | 94.5% | 22.6% |
D2
high
residues 77-173
Domain cluster:
rep: OP380607.1__UYD60882.1__PFPBOIHM_00041__00041__D274-308_322-356
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12236.15 best | Head-tail_con | 44.7 | 8.90e-12 | 99.0% | 19.2% |
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.80 | 51.0 | 6.23e-01 | 96.9% | 98.4% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.78 | 51.0 | 5.86e-01 | 91.8% | 89.0% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 54.0 | 5.59e-01 | 100.0% | 80.2% |
| 2bdeA03 | 1.20.58.1160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 52.0 | 5.73e-01 | 93.8% | 93.5% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 49.0 | 5.05e-01 | 87.6% | 75.0% |
| 2odvA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 51.0 | 4.84e-01 | 94.8% | 66.1% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.69 | 49.0 | 5.40e-01 | 93.8% | 92.2% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 45.0 | 4.48e-01 | 96.9% | 63.5% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.67 | 53.0 | 4.86e-01 | 96.9% | 64.8% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.67 | 47.0 | 5.40e-01 | 85.6% | 100.0% |
| 2hoxA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.65 | 33.0 | 3.21e-01 | 99.0% | 41.6% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.64 | 56.0 | 5.44e-01 | 96.9% | 84.9% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 56.0 | 5.04e-01 | 95.9% | 92.5% |
| 3sfvB02 | 6.10.140.2010 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 48.0 | 3.79e-01 | 81.4% | 42.0% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 55.0 | 5.39e-01 | 95.9% | 95.3% |
| 4modA00 | 1.20.5.300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.62 | 46.0 | 5.14e-01 | 84.5% | 100.0% |
| 2zw3A00 | 1.20.1440.80 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain | 0.61 | 50.0 | 3.89e-01 | 86.6% | 45.8% |
| 4dylA02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.61 | 51.0 | 5.22e-01 | 91.8% | 94.7% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 53.0 | 5.14e-01 | 94.8% | 89.0% |
| 7wu7601 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 52.0 | 5.18e-01 | 90.7% | 89.0% |
| 3thxB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.61 | 51.0 | 4.58e-01 | 88.7% | 82.0% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.60 | 47.0 | 4.73e-01 | 95.9% | 81.8% |
| 4wpcA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.60 | 52.0 | 3.76e-01 | 95.9% | 46.6% |
| 1zvuA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.59 | 49.0 | 4.33e-01 | 90.7% | 84.3% |
| 3aonA00 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 51.0 | 4.08e-01 | 95.9% | 81.9% |
| 6l3tA01 | 1.20.1440.80 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain | 0.57 | 49.0 | 4.01e-01 | 99.0% | 97.0% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 48.0 | 4.87e-01 | 93.8% | 96.9% |
| 5yk4A04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.56 | 50.0 | 4.43e-01 | 95.9% | 97.1% |
| 6k2eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 28.0 | 3.28e-01 | 92.8% | 67.6% |
| 1vp4B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 38.0 | 3.03e-01 | 84.5% | 36.4% |
| 1t7pA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.55 | 44.0 | 3.68e-01 | 84.5% | 99.4% |
| 2kq9A00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.54 | 41.0 | 3.94e-01 | 85.6% | 68.8% |
| 2uuiA00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.53 | 39.0 | 3.37e-01 | 82.5% | 49.0% |
| 3u1nB01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.52 | 41.0 | 2.95e-01 | 88.7% | 89.0% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3792641 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.67 | 54.0 | 5.63e-01 | 95.9% | 92.2% |
| 3605252 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.66 | 58.0 | 4.86e-01 | 95.9% | 70.3% |
| 3185576 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.66 | 58.0 | 4.70e-01 | 95.9% | 72.2% |
| 4953135 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.66 | 54.0 | 4.68e-01 | 87.6% | 97.2% |
| 3717131 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.65 | 58.0 | 4.64e-01 | 95.9% | 65.9% |
| 4564040 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.64 | 58.0 | 5.13e-01 | 96.9% | 90.4% |
| 3734563 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 54.0 | 3.46e-01 | 89.7% | 28.8% |
| 3489607 | 633.23.1.4 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 | 0.64 | 55.0 | 4.21e-01 | 92.8% | 43.7% |
| 3275580 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.64 | 58.0 | 5.04e-01 | 99.0% | 91.0% |
| 5041857 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.64 | 57.0 | 4.99e-01 | 95.9% | 97.1% |
| 3680858 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.64 | 57.0 | 4.74e-01 | 96.9% | 93.9% |
| 4025349 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.63 | 57.0 | 5.21e-01 | 100.0% | 84.6% |
| 3688466 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.62 | 56.0 | 4.68e-01 | 96.9% | 61.3% |
| 3177024 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.62 | 55.0 | 5.26e-01 | 94.8% | 96.4% |
| 4194516 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.61 | 53.0 | 3.86e-01 | 97.9% | 57.2% |
| 5039294 | 4038.1.1.1 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal | 0.61 | 52.0 | 3.89e-01 | 99.0% | 39.6% |
| 3980782 | 4038.1.1.7 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal_2 | 0.61 | 54.0 | 3.74e-01 | 100.0% | 42.1% |
| 4328868 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.61 | 50.0 | 3.62e-01 | 95.9% | 31.4% |
| 3383377 | 2498.1.1.6 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 | 0.60 | 54.0 | 3.25e-01 | 99.0% | 68.4% |
| 3943006 | 4038.1.1.1 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal | 0.60 | 53.0 | 3.84e-01 | 99.0% | 37.2% |
| 3191834 | 4207.1.1.1 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Med21 | 0.60 | 50.0 | 4.41e-01 | 90.7% | 69.3% |
| 4982107 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.59 | 50.0 | 3.37e-01 | 96.9% | 50.9% |
| 4951472 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 53.0 | 4.53e-01 | 95.9% | 73.2% |
| 3212393 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 52.0 | 5.04e-01 | 95.9% | 98.2% |
| 3488429 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.59 | 51.0 | 4.15e-01 | 96.9% | 52.4% |
| 3630462 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.58 | 48.0 | 4.29e-01 | 90.7% | 83.6% |
| 4945806 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.58 | 50.0 | 4.67e-01 | 94.8% | 95.8% |
| 3409703 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.58 | 51.0 | 4.61e-01 | 96.9% | 88.5% |
| 4248590 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 49.0 | 5.09e-01 | 94.8% | 96.7% |
| 5057974 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.57 | 50.0 | 4.73e-01 | 95.9% | 98.3% |
| 4013496 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.57 | 50.0 | 4.35e-01 | 99.0% | 66.7% |
| 3997603 | 601.2.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr | 0.57 | 49.0 | 4.35e-01 | 96.9% | 77.2% |
| 3460582 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.56 | 43.0 | 3.86e-01 | 82.5% | 97.1% |
| 4985036 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.56 | 42.0 | 3.43e-01 | 77.3% | 50.0% |
| 3769170 | 192.2.1.34 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › CpG_bind_C | 0.56 | 49.0 | 4.60e-01 | 94.8% | 88.3% |
| 3591876 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.56 | 45.0 | 4.31e-01 | 88.7% | 97.4% |
| 5023773 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.56 | 48.0 | 3.94e-01 | 92.8% | 61.1% |
| 5047912 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.55 | 25.0 | 3.05e-01 | 88.7% | 64.6% |
| 4525882 | 3747.1.1.3 ↗ | a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bbr_C | 0.55 | 46.0 | 4.54e-01 | 90.7% | 96.2% |
| 3223233 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.54 | 46.0 | 3.56e-01 | 95.9% | 81.7% |
| 2697492 | 4044.1.1.2 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › CODH_A_N | 0.52 | 39.0 | 3.81e-01 | 95.9% | 71.7% |
| 3501757 | 4038.1.1.3 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_connector | 0.52 | 46.0 | 3.61e-01 | 97.9% | 76.7% |
| 5076676 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.52 | 25.0 | 3.00e-01 | 95.9% | 67.7% |
| 5050437 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.52 | 26.0 | 3.15e-01 | 92.8% | 70.8% |
| 4984440 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.52 | 27.0 | 2.89e-01 | 85.6% | 56.8% |
| 3812232 | 101.21.1.1 ↗ | alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit › TP6A_N | 0.51 | 43.0 | 3.82e-01 | 89.7% | 69.6% |
| 5018894 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.50 | 24.0 | 2.89e-01 | 88.7% | 67.7% |
D3
medium
residues 183-295
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12236.15 best | Head-tail_con | 77.8 | 8.40e-22 | 100.0% | 23.1% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 33.0 | 3.40e-01 | 72.6% | 57.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4672672 | 198.3.1.0 ↗ | alpha arrays › Saposin-like › PAS factor › PAS factor | 0.57 | 32.0 | 3.70e-01 | 73.5% | 76.2% |
| 5049396 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.57 | 34.0 | 3.42e-01 | 95.6% | 57.4% |
| 2895299 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.56 | 31.0 | 2.71e-01 | 74.3% | 34.5% |
| 3283436 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.52 | 33.0 | 3.48e-01 | 72.6% | 71.0% |
| 5012672 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.50 | 37.0 | 4.02e-01 | 79.6% | 95.6% |