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IMGVR_UViG_3300026261_000079-3300026261-Ga0208524_10053948
Arc-VirIMGVR_UViG_3300026261_000079-3300026261-Ga0208524_10053948
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-56_129-180
Domain cluster:
rep: KY065149.1__APD18159.1__X__00035__D3-48_122-171
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17212.10 best | Tube | 32.6 | 1.00e-07 | 53.5% | 30.8% |
| PF17212.10 | Tube | 44.4 | 2.50e-11 | 48.5% | 27.8% |
D2
high
residues 60-124
Domain cluster:
rep: KM199771.1__AIK68521.1__Lo5R7ANS_51__00051__D57-121
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17212.10 best | Tube | 28.7 | 1.70e-06 | 100.0% | 32.5% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jsnA00 | 2.30.42.40 | Mainly Beta › Roll › Pdz3 Domain › | 0.54 | 45.0 | 4.09e-01 | 100.0% | 78.1% |
| 1rgxA02 | 2.60.40.4230 | Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain | 0.54 | 40.0 | 4.06e-01 | 100.0% | 87.5% |
| 2zxdA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 42.0 | 3.94e-01 | 98.5% | 95.6% |
| 2k2jA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 35.0 | 3.00e-01 | 72.3% | 88.0% |
| 3cihA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 42.0 | 3.59e-01 | 100.0% | 95.9% |
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.50 | 43.0 | 3.71e-01 | 100.0% | 67.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4873531 | 4275.1.1.6 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Tube | 0.87 | 73.0 | 5.22e-01 | 100.0% | 33.0% |
| 4843675 | 4275.1.1.6 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Tube | 0.83 | 71.0 | 5.35e-01 | 100.0% | 41.1% |
| 4829264 | 4275.1.1.6 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Tube | 0.82 | 74.0 | 5.27e-01 | 100.0% | 37.8% |
| 3090881 | 4275.1.1.0 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like | 0.82 | 72.0 | 5.04e-01 | 100.0% | 31.8% |
| 2722164 | 4275.1.1.6 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Tube | 0.78 | 65.0 | 4.64e-01 | 100.0% | 31.3% |
| 5077063 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.57 | 48.0 | 4.67e-01 | 98.5% | 96.0% |
| 3676320 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 45.0 | 4.46e-01 | 90.8% | 83.8% |
| 3382073 | 10.32.1.247 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SAC9_GBDL_1st | 0.53 | 43.0 | 3.32e-01 | 100.0% | 54.4% |
| 3222818 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.52 | 40.0 | 2.79e-01 | 89.2% | 42.0% |
| 4405937 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 41.0 | 3.83e-01 | 98.5% | 70.6% |
| 4259247 | 1.11.1.1 ↗ | beta barrels › cradle loop barrel › Photosystem II accessory factor Psb28 › Photosystem II accessory factor Psb28 › Psb28 | 0.50 | 39.0 | 3.58e-01 | 93.8% | 83.8% |