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IMGVR_UViG_3300026269_000133-3300026269-Ga0208766_10053981
Arc-VirIMGVR_UViG_3300026269_000133-3300026269-Ga0208766_10053981
Identity
- Kingdom:
- archaea
Quality
85.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-53
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d4eA02 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.66 | 46.0 | 4.01e-01 | 71.7% | 50.0% |
| 2a4vA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.66 | 45.0 | 3.35e-01 | 73.6% | 70.9% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.65 | 46.0 | 2.78e-01 | 75.5% | 61.1% |
| 1urmA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.65 | 44.0 | 3.19e-01 | 71.7% | 75.9% |
| 2x49A01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.64 | 47.0 | 3.84e-01 | 77.4% | 78.1% |
| 5xrkA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 47.0 | 3.58e-01 | 100.0% | 30.5% |
| 6cz7A01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.64 | 48.0 | 4.59e-01 | 83.0% | 69.4% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 46.0 | 4.35e-01 | 92.5% | 64.2% |
| 6hrgA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.62 | 53.0 | 3.44e-01 | 94.3% | 57.5% |
| 6xofA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 53.0 | 3.46e-01 | 100.0% | 24.9% |
| 2ebkA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.61 | 42.0 | 3.17e-01 | 71.7% | 35.2% |
| 2ozgA03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.61 | 43.0 | 3.59e-01 | 73.6% | 41.5% |
| 5khaB01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.60 | 46.0 | 3.01e-01 | 84.9% | 66.2% |
| 3gmvX00 | 3.10.450.730 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › BLIP domain | 0.60 | 42.0 | 3.03e-01 | 75.5% | 26.9% |
| 1x49A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 50.0 | 4.65e-01 | 96.2% | 77.1% |
| 3zpyB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 49.0 | 3.25e-01 | 100.0% | 21.1% |
| 1cidA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 49.0 | 4.01e-01 | 96.2% | 94.3% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 48.0 | 4.06e-01 | 92.5% | 55.3% |
| 2pwjA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 39.0 | 2.92e-01 | 73.6% | 75.3% |
| 1fm2B03 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.57 | 40.0 | 3.78e-01 | 75.5% | 75.8% |
| 4ad8A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 42.0 | 2.62e-01 | 81.1% | 16.8% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 40.0 | 4.02e-01 | 94.3% | 76.8% |
| 2if7B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 3.87e-01 | 92.5% | 74.7% |
| 1jpdX01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 40.0 | 3.31e-01 | 75.5% | 56.6% |
| 3wasA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 45.0 | 2.80e-01 | 100.0% | 84.6% |
| 1z6bA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 46.0 | 3.51e-01 | 100.0% | 40.1% |
| 4yhxA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 39.0 | 3.03e-01 | 84.9% | 83.7% |
| 2mnjB00 | 2.60.40.4160 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 41.0 | 3.67e-01 | 100.0% | 58.0% |
| 4yisB02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 38.0 | 2.98e-01 | 83.0% | 79.4% |
| 4ywrA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 46.0 | 3.00e-01 | 98.1% | 75.4% |
| 2kx2A00 | 3.30.780.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › | 0.52 | 37.0 | 3.22e-01 | 81.1% | 68.8% |
| 7fctA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 40.0 | 2.75e-01 | 94.3% | 63.8% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 37.0 | 3.45e-01 | 96.2% | 59.0% |
| 2khxA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 39.0 | 3.58e-01 | 92.5% | 72.2% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4287655 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.73 | 52.0 | 5.17e-01 | 75.5% | 96.4% |
| 4278706 | 1001.1.1.1 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 | 0.72 | 48.0 | 4.66e-01 | 71.7% | 61.7% |
| 3805678 | 3459.1.1.3 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 | 0.72 | 54.0 | 4.24e-01 | 83.0% | 63.5% |
| 3260746 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.72 | 50.0 | 5.12e-01 | 73.6% | 78.0% |
| 4969029 | 1001.1.1.0 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 | 0.71 | 50.0 | 4.70e-01 | 75.5% | 64.6% |
| 3663321 | 65.1.1.9 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › ALN_composite | 0.69 | 48.0 | 4.93e-01 | 73.6% | 78.0% |
| 3372678 | 65.1.1.9 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › ALN_composite | 0.69 | 47.0 | 4.41e-01 | 71.7% | 58.5% |
| 3979229 | 1001.1.1.1 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 | 0.69 | 52.0 | 4.79e-01 | 83.0% | 64.3% |
| 3346599 | 3459.1.1.3 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 | 0.68 | 51.0 | 4.29e-01 | 83.0% | 72.0% |
| 3979027 | 1001.1.1.1 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 | 0.67 | 48.0 | 4.27e-01 | 75.5% | 54.7% |
| 2140806 | 2485.1.1.43 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_6 | 0.67 | 46.0 | 3.63e-01 | 71.7% | 64.3% |
| 3435374 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.66 | 57.0 | 4.87e-01 | 96.2% | 63.5% |
| 5021368 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.65 | 56.0 | 3.44e-01 | 98.1% | 16.9% |
| 3748189 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.64 | 53.0 | 4.69e-01 | 94.3% | 66.3% |
| 4952427 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.63 | 53.0 | 4.85e-01 | 92.5% | 74.3% |
| 3895829 | 233.1.1.3 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_II_alpha | 0.63 | 46.0 | 3.77e-01 | 77.4% | 66.3% |
| 3922774 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.62 | 44.0 | 4.53e-01 | 75.5% | 98.0% |
| 3493131 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.62 | 52.0 | 4.26e-01 | 94.3% | 58.0% |
| 3898432 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.62 | 51.0 | 4.34e-01 | 94.3% | 58.9% |
| 3705941 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 49.0 | 4.26e-01 | 86.8% | 57.5% |
| 3169953 | 2484.5.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase | 0.62 | 44.0 | 3.07e-01 | 75.5% | 32.1% |
| 3222974 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.62 | 50.0 | 4.07e-01 | 92.5% | 56.2% |
| 3386501 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 52.0 | 4.63e-01 | 94.3% | 89.3% |
| 3922537 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.61 | 50.0 | 4.05e-01 | 92.5% | 49.5% |
| 3176331 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 44.0 | 3.08e-01 | 77.4% | 32.7% |
| 3193143 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.60 | 41.0 | 2.48e-01 | 71.7% | 12.6% |
| 3764041 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.59 | 50.0 | 4.47e-01 | 98.1% | 68.8% |
| 3258685 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 42.0 | 3.32e-01 | 77.4% | 36.5% |
| 3521505 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.58 | 48.0 | 4.00e-01 | 92.5% | 54.7% |
| 4039170 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.57 | 49.0 | 3.14e-01 | 94.3% | 74.1% |
| 5021465 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 49.0 | 3.09e-01 | 94.3% | 69.5% |
| 3331706 | 222.1.1.5 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › FabA | 0.57 | 46.0 | 4.10e-01 | 92.5% | 66.7% |
| 3416381 | 5.1.4.320 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 | 0.56 | 46.0 | 2.83e-01 | 94.3% | 94.1% |
| 5054268 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.54 | 39.0 | 3.78e-01 | 92.5% | 66.2% |
| 5012091 | 213.1.1.17 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1122 | 0.53 | 36.0 | 2.59e-01 | 75.5% | 21.7% |
| 3974132 | 4152.2.1.0 ↗ | a+b two layers › Shew3726-like › Uncharacterized protein CV_2116 › Uncharacterized protein CV_2116 | 0.51 | 36.0 | 3.37e-01 | 81.1% | 68.0% |
| 3709493 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 36.0 | 2.86e-01 | 94.3% | 32.3% |
| 4973274 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.51 | 37.0 | 3.72e-01 | 94.3% | 83.6% |