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IMGVR_UViG_3300026269_000133-3300026269-Ga0208766_10053988
Arc-VirIMGVR_UViG_3300026269_000133-3300026269-Ga0208766_10053988
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-143
Domain cluster:
rep: NC_019408.1__YP_006989129.1__D869_gp332__00100__D20-163
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 43.0 | 5.32e-01 | 76.4% | 96.6% |
| 4dnyA00 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 45.0 | 5.04e-01 | 79.3% | 90.8% |
| 2g3mA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 26.0 | 3.39e-01 | 73.6% | 72.0% |
| 4v02C00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.51 | 37.0 | 3.92e-01 | 82.1% | 85.2% |
| 4g6vA00 | 3.40.1350.120 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.51 | 32.0 | 3.35e-01 | 81.4% | 65.9% |
| 5tk2B00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.51 | 31.0 | 3.84e-01 | 75.0% | 96.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942383 | 520.2.1.0 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE | 0.91 | 58.0 | 7.24e-01 | 79.3% | 100.0% |
| 2710204 | 2004.1.1.415 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, RuvB_N | 0.55 | 45.0 | 3.81e-01 | 89.3% | 90.4% |
| 4092984 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.54 | 47.0 | 3.94e-01 | 96.4% | 87.5% |
| 4667612 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.54 | 46.0 | 3.81e-01 | 96.4% | 89.1% |
| 4682600 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.53 | 46.0 | 3.77e-01 | 97.1% | 87.9% |
| 4143020 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.53 | 46.0 | 3.78e-01 | 96.4% | 89.6% |
| 4091335 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.52 | 45.0 | 3.68e-01 | 96.4% | 88.1% |
| 3450580 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 34.0 | 3.50e-01 | 82.9% | 69.6% |
| 3463195 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.50 | 40.0 | 3.24e-01 | 83.6% | 61.3% |
D2
high
residues 231-330
Domain cluster:
rep: MW452941.1__QRV71445.1__MEP301_gp17__00017__D33-130