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IMGVR_UViG_3300026290_000012-3300026290-Ga0209510_100040262

Arc-Vir

IMGVR_UViG_3300026290_000012-3300026290-Ga0209510_100040262

Quality

88.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-45
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fvqA02 2.40.50.450 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 46.0 4.68e-01 95.3% 86.4%
1ggoA03 3.50.30.10 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Phosphohistidine domain 0.59 48.0 3.64e-01 100.0% 85.4%
2xlpB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 38.0 2.34e-01 74.4% 20.3%
2mlkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 39.0 3.02e-01 76.7% 68.2%
1h6eA02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.53 45.0 3.47e-01 100.0% 70.5%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 41.0 3.93e-01 95.3% 78.6%
1kk1A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 2.73e-01 100.0% 62.2%
1rvkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.50 36.0 2.85e-01 86.0% 90.5%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4317833 2.1.1.264 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › BrxL_N 0.66 56.0 4.10e-01 100.0% 43.1%
4962650 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 56.0 5.28e-01 100.0% 81.8%
5071905 12.1.1.50 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_31_3rd 0.58 39.0 3.23e-01 100.0% 36.5%
3989602 12.1.1.50 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_31_3rd 0.56 41.0 3.36e-01 100.0% 40.0%
3414096 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.55 45.0 3.34e-01 93.0% 73.8%
3393085 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 42.0 3.69e-01 100.0% 88.0%
3503404 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 43.0 3.33e-01 100.0% 91.7%
3391894 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.51 43.0 3.66e-01 95.3% 62.9%
3164387 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.50 36.0 3.68e-01 97.7% 91.1%