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IMGVR_UViG_3300026290_000528-3300026290-Ga0209510_10123541
Arc-VirIMGVR_UViG_3300026290_000528-3300026290-Ga0209510_10123541
Identity
- Kingdom:
- archaea
Quality
68.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 54-103
Domain cluster:
representative
CATH (64)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2np2A00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.91 | 62.0 | 4.80e-01 | 72.0% | 35.3% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.90 | 66.0 | 6.43e-01 | 92.0% | 70.9% |
| 1tc3C00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.89 | 64.0 | 6.42e-01 | 86.0% | 74.5% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.84 | 74.0 | 5.94e-01 | 100.0% | 55.7% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 68.0 | 5.26e-01 | 94.0% | 42.0% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 66.0 | 5.21e-01 | 94.0% | 45.6% |
| 1mzbA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 65.0 | 5.50e-01 | 94.0% | 59.8% |
| 1x4qA01 | 1.20.1390.10 | Mainly Alpha › Up-down Bundle › PWI domain › PWI domain | 0.76 | 62.0 | 5.60e-01 | 94.0% | 66.2% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 63.0 | 5.53e-01 | 94.0% | 65.3% |
| 16vpA00 | 1.10.1290.10 | Mainly Alpha › Orthogonal Bundle › Conserved core of transcriptional regulatory protein vp16 › Alpha trans-inducing (Alpha-TIF) | 0.74 | 51.0 | 3.10e-01 | 72.0% | 12.2% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 61.0 | 5.05e-01 | 94.0% | 53.8% |
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 59.0 | 5.20e-01 | 94.0% | 61.5% |
| 4dbgB01 | 6.10.140.1100 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 48.0 | 4.99e-01 | 70.0% | 80.9% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.72 | 60.0 | 4.77e-01 | 100.0% | 52.7% |
| 3dkqA02 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.71 | 46.0 | 4.73e-01 | 92.0% | 70.2% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 56.0 | 4.81e-01 | 86.0% | 56.4% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.70 | 57.0 | 4.23e-01 | 96.0% | 44.1% |
| 2p5kA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 55.0 | 5.16e-01 | 88.0% | 73.0% |
| 2ew2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.70 | 58.0 | 4.42e-01 | 100.0% | 59.0% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 57.0 | 4.54e-01 | 94.0% | 45.7% |
| 2h92A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 61.0 | 3.98e-01 | 100.0% | 45.4% |
| 3lapA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 56.0 | 5.17e-01 | 94.0% | 92.6% |
| 3a1yA00 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.69 | 55.0 | 5.30e-01 | 94.0% | 82.8% |
| 2o35A00 | 1.10.3340.10 | Mainly Alpha › Orthogonal Bundle › SMc04008-like fold › SMc04008-like | 0.68 | 47.0 | 4.07e-01 | 72.0% | 75.9% |
| 3d3oA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.66 | 55.0 | 3.85e-01 | 98.0% | 58.5% |
| 3vw4A01 | 1.10.340.50 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.66 | 54.0 | 4.63e-01 | 100.0% | 72.8% |
| 1w36C06 | 1.10.10.990 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.66 | 54.0 | 4.94e-01 | 100.0% | 80.6% |
| 1v1gA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.66 | 44.0 | 2.98e-01 | 76.0% | 17.6% |
| 4gbjC02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.66 | 53.0 | 3.94e-01 | 92.0% | 83.0% |
| 2lbfB01 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 52.0 | 4.81e-01 | 94.0% | 71.0% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 45.0 | 3.88e-01 | 74.0% | 49.4% |
| 1uaaA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.64 | 50.0 | 4.55e-01 | 94.0% | 67.6% |
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 47.0 | 4.20e-01 | 82.0% | 78.7% |
| 1knzA01 | 6.10.280.20 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Rotavirus non-structural protein NSP3, N-terminal domain | 0.64 | 44.0 | 3.59e-01 | 74.0% | 37.3% |
| 1gakA00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.64 | 44.0 | 3.23e-01 | 74.0% | 27.7% |
| 1g2rA00 | 3.30.1230.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like | 0.63 | 55.0 | 4.50e-01 | 100.0% | 70.2% |
| 1o82A00 | 1.20.225.10 | Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Bacteriocin AS-48 | 0.63 | 51.0 | 4.64e-01 | 94.0% | 78.6% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.63 | 54.0 | 3.97e-01 | 98.0% | 47.9% |
| 2g7lA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 43.0 | 2.92e-01 | 74.0% | 60.2% |
| 1cukA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.62 | 52.0 | 4.65e-01 | 100.0% | 68.4% |
| 1q1qA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 52.0 | 3.14e-01 | 90.0% | 54.3% |
| 2qvaA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.61 | 44.0 | 4.39e-01 | 86.0% | 73.6% |
| 3kbbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 51.0 | 4.67e-01 | 98.0% | 77.1% |
| 1y56A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 48.0 | 3.14e-01 | 90.0% | 19.8% |
| 2uyyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.61 | 48.0 | 3.76e-01 | 94.0% | 85.4% |
| 3b0bB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.60 | 43.0 | 3.54e-01 | 80.0% | 39.2% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 45.0 | 4.13e-01 | 88.0% | 89.0% |
| 6hxlB01 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.59 | 50.0 | 3.92e-01 | 100.0% | 86.0% |
| 2v9kA01 | 1.10.10.2050 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.59 | 49.0 | 4.96e-01 | 92.0% | 96.0% |
| 4mspB02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.59 | 45.0 | 3.98e-01 | 84.0% | 89.3% |
| 3cl3A01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.59 | 42.0 | 3.54e-01 | 76.0% | 52.4% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.58 | 47.0 | 4.21e-01 | 94.0% | 73.0% |
| 3eo8A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.57 | 41.0 | 2.70e-01 | 76.0% | 26.5% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 49.0 | 3.94e-01 | 100.0% | 82.9% |
| 2vkjA00 | 1.20.58.2030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 45.0 | 3.66e-01 | 98.0% | 44.3% |
| 6zhiB02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 44.0 | 3.66e-01 | 84.0% | 51.8% |
| 6rqxA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.56 | 49.0 | 3.12e-01 | 100.0% | 35.8% |
| 4pytA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.55 | 45.0 | 3.50e-01 | 100.0% | 53.9% |
| 4ndoA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.55 | 45.0 | 2.93e-01 | 94.0% | 87.3% |
| 2xb4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 44.0 | 2.99e-01 | 100.0% | 85.2% |
| 6hxpA01 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.54 | 43.0 | 3.55e-01 | 94.0% | 99.0% |
| 1ma1A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.53 | 44.0 | 4.11e-01 | 92.0% | 87.5% |
| 1fmjA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 42.0 | 2.66e-01 | 98.0% | 65.5% |
| 3u9rB02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.53 | 38.0 | 2.48e-01 | 84.0% | 14.8% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928271 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 69.0 | 7.56e-01 | 78.0% | 100.0% |
| 5024512 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 75.0 | 7.57e-01 | 88.0% | 90.0% |
| 5029219 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 73.0 | 7.08e-01 | 86.0% | 78.2% |
| 3884712 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 68.0 | 7.19e-01 | 80.0% | 88.9% |
| 4944585 | 101.1.2.872 ↗ | alpha arrays › HTH › HTH › winged helix domain › rve | 0.87 | 72.0 | 6.80e-01 | 90.0% | 78.3% |
| 4945040 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 72.0 | 6.77e-01 | 90.0% | 76.7% |
| 4946654 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 72.0 | 6.76e-01 | 90.0% | 78.3% |
| 2036845 | 3546.1.1.1 ↗ | alpha arrays › Peroxisomal biogenesis factor 14 N-terminal domain › Peroxisomal biogenesis factor 14 N-terminal domain › Peroxisomal biogenesis factor 14 N-terminal domain › Pex14_N | 0.87 | 66.0 | 5.88e-01 | 82.0% | 58.6% |
| 4983508 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 72.0 | 6.45e-01 | 92.0% | 70.0% |
| 4950639 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 70.0 | 4.72e-01 | 92.0% | 26.8% |
| 4998684 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 72.0 | 5.80e-01 | 94.0% | 53.7% |
| 3899987 | 101.1.1.12 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 | 0.85 | 69.0 | 5.76e-01 | 90.0% | 56.5% |
| 3239718 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 71.0 | 6.54e-01 | 94.0% | 72.3% |
| 4978129 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.84 | 75.0 | 4.36e-01 | 100.0% | 13.2% |
| 5079733 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 71.0 | 6.18e-01 | 94.0% | 65.3% |
| 4968278 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.84 | 72.0 | 6.04e-01 | 96.0% | 61.2% |
| 4145524 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.84 | 67.0 | 6.17e-01 | 88.0% | 70.8% |
| 5080146 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.83 | 71.0 | 5.64e-01 | 96.0% | 52.0% |
| 3590551 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.83 | 67.0 | 6.74e-01 | 88.0% | 92.0% |
| 5044657 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 69.0 | 6.55e-01 | 94.0% | 80.0% |
| 3247470 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.82 | 72.0 | 4.98e-01 | 100.0% | 36.4% |
| 3590474 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 74.0 | 6.12e-01 | 100.0% | 62.4% |
| 3942452 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.81 | 65.0 | 5.81e-01 | 88.0% | 65.7% |
| 3887965 | 101.1.1.12 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 | 0.81 | 64.0 | 6.28e-01 | 88.0% | 87.3% |
| 3878549 | 101.1.2.536 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 | 0.81 | 64.0 | 6.27e-01 | 88.0% | 87.3% |
| 4236554 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.81 | 65.0 | 6.11e-01 | 88.0% | 76.7% |
| 3969119 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.81 | 64.0 | 6.24e-01 | 88.0% | 85.5% |
| 5047202 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 67.0 | 6.04e-01 | 94.0% | 67.1% |
| 4971352 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 69.0 | 5.77e-01 | 96.0% | 56.5% |
| 4979742 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 66.0 | 5.71e-01 | 94.0% | 61.3% |
| 3504540 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.80 | 65.0 | 6.30e-01 | 88.0% | 83.6% |
| 4929680 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 71.0 | 6.68e-01 | 100.0% | 86.7% |
| 3164764 | 2008.1.1.168 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF30184 | 0.80 | 68.0 | 5.74e-01 | 96.0% | 62.4% |
| 3981939 | 101.1.1.202 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 | 0.80 | 63.0 | 6.18e-01 | 88.0% | 85.5% |
| 3956565 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.80 | 64.0 | 5.37e-01 | 88.0% | 54.1% |
| 3519342 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.80 | 65.0 | 6.33e-01 | 88.0% | 83.6% |
| 3934874 | 101.1.1.396 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Arg_repressor | 0.80 | 64.0 | 6.28e-01 | 90.0% | 87.3% |
| 4933807 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 68.0 | 5.71e-01 | 96.0% | 72.9% |
| 3506989 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 68.0 | 6.82e-01 | 94.0% | 96.0% |
| 3801560 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.79 | 69.0 | 4.24e-01 | 100.0% | 20.7% |
| 4998763 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 64.0 | 5.58e-01 | 94.0% | 61.3% |
| 3941666 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.79 | 71.0 | 6.22e-01 | 100.0% | 67.6% |
| 3858855 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.78 | 69.0 | 4.85e-01 | 100.0% | 38.1% |
| 3987150 | 101.1.1.382 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_IS66 | 0.78 | 65.0 | 6.54e-01 | 92.0% | 98.0% |
| 3334681 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.78 | 58.0 | 6.09e-01 | 82.0% | 100.0% |
| 3946360 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 71.0 | 6.44e-01 | 100.0% | 76.9% |
| 3219897 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 61.0 | 6.17e-01 | 94.0% | 88.0% |
| 3984964 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.78 | 62.0 | 5.44e-01 | 88.0% | 61.3% |
| 5074546 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 64.0 | 5.44e-01 | 94.0% | 57.6% |
| 3927016 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.78 | 68.0 | 4.65e-01 | 100.0% | 35.4% |
| 4927804 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 68.0 | 5.98e-01 | 100.0% | 72.0% |
| 3983493 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.77 | 62.0 | 6.21e-01 | 88.0% | 92.0% |
| 4279089 | 7094.1.1.3 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › OPA1_C | 0.77 | 66.0 | 5.08e-01 | 100.0% | 52.5% |
| 3942167 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.77 | 61.0 | 5.79e-01 | 88.0% | 80.0% |
| 5032570 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 62.0 | 5.08e-01 | 92.0% | 55.8% |
| 3196401 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 65.0 | 6.34e-01 | 100.0% | 90.9% |
| 3929264 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.76 | 59.0 | 4.86e-01 | 88.0% | 48.4% |
| 4929129 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 62.0 | 5.90e-01 | 96.0% | 88.3% |
| 3987405 | 101.1.1.202 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 | 0.74 | 61.0 | 5.12e-01 | 94.0% | 56.7% |
| 4025261 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 64.0 | 4.99e-01 | 100.0% | 53.6% |
| 5037265 | 102.1.1.11 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 | 0.74 | 60.0 | 4.77e-01 | 100.0% | 43.6% |
| 5047005 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 61.0 | 5.73e-01 | 98.0% | 78.5% |
| 4933483 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 60.0 | 5.10e-01 | 94.0% | 61.2% |
| 3987909 | 138.1.1.9 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C | 0.72 | 63.0 | 4.63e-01 | 100.0% | 67.4% |
| 3606649 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.72 | 58.0 | 3.64e-01 | 88.0% | 17.6% |
| 4944988 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.72 | 66.0 | 4.14e-01 | 100.0% | 30.0% |
| 3988910 | 101.1.1.382 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_IS66 | 0.72 | 58.0 | 6.04e-01 | 96.0% | 100.0% |
| 3890613 | 101.1.2.698 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27079 | 0.72 | 57.0 | 5.31e-01 | 90.0% | 72.3% |
| 3291410 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.72 | 57.0 | 4.98e-01 | 88.0% | 66.7% |
| 3963583 | 2008.1.1.67 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecC_C | 0.71 | 60.0 | 3.73e-01 | 100.0% | 27.5% |
| 4979726 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 56.0 | 5.15e-01 | 94.0% | 71.4% |
| 4027348 | 592.7.1.0 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain | 0.68 | 58.0 | 5.18e-01 | 100.0% | 69.3% |
| 4946761 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.68 | 53.0 | 4.79e-01 | 86.0% | 64.3% |
| 4928356 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 52.0 | 4.94e-01 | 90.0% | 76.9% |
| 3626769 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.68 | 48.0 | 3.97e-01 | 86.0% | 42.2% |
| 4411256 | 2004.1.1.80 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin | 0.67 | 58.0 | 3.78e-01 | 100.0% | 62.4% |
| 3488979 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.67 | 48.0 | 3.54e-01 | 86.0% | 30.4% |
| 3632179 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.66 | 52.0 | 4.65e-01 | 90.0% | 74.7% |
| 3420661 | 592.7.1.0 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain | 0.66 | 53.0 | 4.57e-01 | 94.0% | 55.3% |
| 3617957 | 3198.1.1.1 ↗ | alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA | 0.65 | 45.0 | 3.40e-01 | 74.0% | 82.5% |
| 4624086 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.63 | 51.0 | 3.49e-01 | 92.0% | 81.4% |
| 3286351 | 304.154.1.1 ↗ | a+b two layers › Alpha-beta plaits › Regulator of polyketide synthase expression N-terminal domain › Regulator of polyketide synthase expression N-terminal domain › GGDEF_2 | 0.60 | 50.0 | 3.69e-01 | 100.0% | 89.7% |
| 3737539 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.60 | 48.0 | 4.26e-01 | 96.0% | 95.0% |
| 3870636 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 46.0 | 4.36e-01 | 96.0% | 96.9% |
| 3331610 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.57 | 45.0 | 2.99e-01 | 96.0% | 18.8% |
| 4527588 | 3755.1.1.25 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › H-kinase_dim | 0.53 | 46.0 | 3.57e-01 | 96.0% | 91.4% |
| 3883209 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.52 | 43.0 | 2.83e-01 | 100.0% | 78.8% |
D2
high
residues 137-180
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 69.0 | 5.89e-01 | 97.7% | 54.3% |
| 1u78A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 73.0 | 7.26e-01 | 100.0% | 93.3% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 66.0 | 5.57e-01 | 100.0% | 52.0% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 70.0 | 5.20e-01 | 100.0% | 38.4% |
| 1wy9A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.78 | 58.0 | 4.23e-01 | 79.5% | 36.0% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 67.0 | 5.69e-01 | 100.0% | 60.0% |
| 1mzbA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 67.0 | 5.49e-01 | 100.0% | 54.9% |
| 3lapA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 64.0 | 5.71e-01 | 100.0% | 69.1% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 67.0 | 5.90e-01 | 100.0% | 71.2% |
| 2p5kA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 62.0 | 5.66e-01 | 100.0% | 73.0% |
| 2h92A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 56.0 | 3.58e-01 | 88.6% | 79.2% |
| 2fe3B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 61.0 | 4.94e-01 | 100.0% | 54.1% |
| 3g0oA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.68 | 57.0 | 4.27e-01 | 100.0% | 84.3% |
| 3e3rB01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.67 | 58.0 | 4.74e-01 | 100.0% | 74.1% |
| 1ug3A02 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.67 | 57.0 | 4.17e-01 | 100.0% | 71.9% |
| 2lbfB01 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.67 | 54.0 | 4.86e-01 | 100.0% | 66.7% |
| 3dteA02 | 1.10.10.1030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain | 0.67 | 50.0 | 5.13e-01 | 88.6% | 100.0% |
| 3d3oA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.65 | 52.0 | 3.56e-01 | 93.2% | 26.7% |
| 2c4nA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.65 | 58.0 | 3.99e-01 | 100.0% | 66.4% |
| 3cx5A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.65 | 53.0 | 3.46e-01 | 100.0% | 67.3% |
| 5e37A02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.65 | 48.0 | 3.90e-01 | 79.5% | 46.5% |
| 3nufB00 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.65 | 53.0 | 4.02e-01 | 95.5% | 92.0% |
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 51.0 | 4.40e-01 | 95.5% | 80.0% |
| 4dbgB01 | 6.10.140.1100 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 46.0 | 4.59e-01 | 81.8% | 80.9% |
| 2ew2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.63 | 48.0 | 3.67e-01 | 100.0% | 49.3% |
| 1rylA00 | 3.40.1760.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › YfbM-like super family | 0.62 | 49.0 | 3.53e-01 | 100.0% | 63.1% |
| 3d0wA00 | 1.10.760.20 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Protein of unknown function DUF3243 | 0.60 | 46.0 | 3.82e-01 | 88.6% | 84.9% |
| 2kvdA02 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.60 | 41.0 | 3.77e-01 | 77.3% | 55.2% |
| 1q1qA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 43.0 | 2.77e-01 | 90.9% | 60.1% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.59 | 37.0 | 3.31e-01 | 90.9% | 43.3% |
| 2b0cA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 48.0 | 4.25e-01 | 100.0% | 87.9% |
| 3kbbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 45.0 | 4.00e-01 | 97.7% | 71.4% |
| 2h5nC00 | 1.10.3680.10 | Mainly Alpha › Orthogonal Bundle › TerB-like › TerB-like | 0.55 | 44.0 | 3.39e-01 | 100.0% | 37.9% |
| 6t0bf00 | 1.25.40.40 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI | 0.53 | 43.0 | 3.42e-01 | 97.7% | 41.2% |
| 4dlqA02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 42.0 | 3.41e-01 | 95.5% | 49.5% |
| 3u9rB02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.52 | 34.0 | 2.22e-01 | 70.5% | 13.7% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 37.0 | 2.97e-01 | 84.1% | 78.1% |
| 3mnfA00 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.50 | 39.0 | 2.57e-01 | 90.9% | 82.1% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928271 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.99 | 83.0 | 8.71e-01 | 88.6% | 100.0% |
| 4945040 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.98 | 92.0 | 8.11e-01 | 100.0% | 75.0% |
| 4944585 | 101.1.2.872 ↗ | alpha arrays › HTH › HTH › winged helix domain › rve | 0.98 | 91.0 | 8.07e-01 | 100.0% | 75.0% |
| 4946654 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.97 | 90.0 | 8.00e-01 | 100.0% | 75.0% |
| 4959187 | 101.1.2.489 ↗ | alpha arrays › HTH › HTH › winged helix domain › Transposase_mut | 0.95 | 86.0 | 8.18e-01 | 97.7% | 88.0% |
| 2036845 | 3546.1.1.1 ↗ | alpha arrays › Peroxisomal biogenesis factor 14 N-terminal domain › Peroxisomal biogenesis factor 14 N-terminal domain › Peroxisomal biogenesis factor 14 N-terminal domain › Pex14_N | 0.95 | 83.0 | 6.90e-01 | 93.2% | 58.6% |
| 3941666 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.93 | 85.0 | 7.02e-01 | 100.0% | 60.8% |
| 3590474 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 85.0 | 6.68e-01 | 100.0% | 52.9% |
| 3899987 | 101.1.1.12 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 | 0.93 | 84.0 | 6.66e-01 | 100.0% | 54.1% |
| 3946360 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 84.0 | 7.31e-01 | 100.0% | 69.2% |
| 4929680 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.93 | 84.0 | 7.51e-01 | 100.0% | 73.3% |
| 5047162 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 81.0 | 7.06e-01 | 97.7% | 67.7% |
| 3884712 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 76.0 | 7.63e-01 | 93.2% | 91.1% |
| 4938633 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 80.0 | 5.51e-01 | 100.0% | 31.9% |
| 4950639 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 79.0 | 5.24e-01 | 100.0% | 26.2% |
| 4927588 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 80.0 | 6.65e-01 | 100.0% | 60.0% |
| 5029219 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 81.0 | 7.50e-01 | 100.0% | 81.8% |
| 3692027 | 101.1.2.480 ↗ | alpha arrays › HTH › HTH › winged helix domain › Clr5 | 0.89 | 80.0 | 7.42e-01 | 100.0% | 85.5% |
| 4927804 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.89 | 79.0 | 6.57e-01 | 100.0% | 58.7% |
| 4103293 | 101.1.2.62 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sigma54_DBD | 0.89 | 79.0 | 6.42e-01 | 100.0% | 62.5% |
| 3998215 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.88 | 79.0 | 6.55e-01 | 100.0% | 61.3% |
| 3987150 | 101.1.1.382 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_IS66 | 0.88 | 77.0 | 7.42e-01 | 100.0% | 90.0% |
| 4958380 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.88 | 77.0 | 4.65e-01 | 100.0% | 15.7% |
| 3391047 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 78.0 | 7.00e-01 | 100.0% | 76.7% |
| 4145524 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.87 | 77.0 | 6.75e-01 | 100.0% | 73.8% |
| 5040994 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 76.0 | 6.35e-01 | 100.0% | 58.7% |
| 3934874 | 101.1.1.396 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Arg_repressor | 0.86 | 75.0 | 7.05e-01 | 100.0% | 83.6% |
| 3984597 | 101.1.2.488 ↗ | alpha arrays › HTH › HTH › winged helix domain › DDE_Tnp_IS66 | 0.86 | 74.0 | 5.91e-01 | 100.0% | 50.0% |
| 3887965 | 101.1.1.12 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 | 0.86 | 74.0 | 6.95e-01 | 100.0% | 83.6% |
| 3878549 | 101.1.2.536 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 | 0.86 | 74.0 | 6.94e-01 | 100.0% | 83.6% |
| 5074546 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 74.0 | 5.98e-01 | 100.0% | 54.1% |
| 3477001 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.85 | 76.0 | 5.14e-01 | 100.0% | 34.0% |
| 3988910 | 101.1.1.382 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_IS66 | 0.84 | 70.0 | 6.99e-01 | 95.5% | 95.6% |
| 4926913 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.84 | 74.0 | 4.87e-01 | 100.0% | 25.7% |
| 3981939 | 101.1.1.202 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 | 0.84 | 72.0 | 6.77e-01 | 100.0% | 85.5% |
| 4008378 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.84 | 72.0 | 6.75e-01 | 100.0% | 85.5% |
| 5044657 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 76.0 | 6.76e-01 | 100.0% | 73.3% |
| 3590551 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.83 | 73.0 | 7.02e-01 | 100.0% | 94.0% |
| 4567935 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 73.0 | 6.43e-01 | 100.0% | 89.2% |
| 4008778 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 71.0 | 6.65e-01 | 100.0% | 83.6% |
| 4236554 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.82 | 74.0 | 6.64e-01 | 100.0% | 75.0% |
| 3970076 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 70.0 | 6.77e-01 | 100.0% | 94.0% |
| 3164764 | 2008.1.1.168 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF30184 | 0.82 | 73.0 | 5.83e-01 | 100.0% | 54.1% |
| 5042816 | 182.1.3.0 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX | 0.82 | 72.0 | 5.79e-01 | 100.0% | 51.8% |
| 4979742 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 71.0 | 5.84e-01 | 100.0% | 56.2% |
| 3196401 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 68.0 | 6.43e-01 | 100.0% | 78.2% |
| 3956565 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.81 | 71.0 | 5.70e-01 | 100.0% | 56.5% |
| 3504540 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.80 | 70.0 | 6.51e-01 | 100.0% | 87.3% |
| 3983493 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.80 | 71.0 | 6.79e-01 | 100.0% | 90.0% |
| 3984964 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.80 | 70.0 | 5.90e-01 | 100.0% | 60.0% |
| 4964860 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 64.0 | 5.44e-01 | 100.0% | 54.7% |
| 5079733 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 66.0 | 5.68e-01 | 100.0% | 61.3% |
| 3858855 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.79 | 67.0 | 4.63e-01 | 100.0% | 32.9% |
| 3506989 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 69.0 | 6.63e-01 | 100.0% | 90.0% |
| 3219897 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 63.0 | 6.15e-01 | 100.0% | 84.0% |
| 4182885 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 66.0 | 5.92e-01 | 100.0% | 72.3% |
| 4946761 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.77 | 67.0 | 5.79e-01 | 100.0% | 62.9% |
| 3940641 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 63.0 | 5.72e-01 | 100.0% | 67.7% |
| 5032570 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 65.0 | 5.13e-01 | 100.0% | 49.5% |
| 3890613 | 101.1.2.698 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27079 | 0.74 | 62.0 | 5.57e-01 | 100.0% | 72.3% |
| 4978129 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 59.0 | 3.45e-01 | 97.7% | 10.5% |
| 4944988 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.73 | 64.0 | 3.98e-01 | 97.7% | 28.3% |
| 3334681 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.73 | 59.0 | 5.95e-01 | 100.0% | 95.6% |
| 4937490 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.73 | 55.0 | 5.70e-01 | 93.2% | 97.5% |
| 3672635 | 101.1.1.295 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 | 0.72 | 60.0 | 5.15e-01 | 100.0% | 64.0% |
| 4609007 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.69 | 56.0 | 5.52e-01 | 100.0% | 88.0% |
| 3248091 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.68 | 54.0 | 4.25e-01 | 84.1% | 100.0% |
| 4027348 | 592.7.1.0 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain | 0.67 | 51.0 | 4.63e-01 | 100.0% | 62.7% |
| 3632179 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.66 | 55.0 | 4.73e-01 | 97.7% | 81.3% |
| 3737539 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.65 | 51.0 | 4.45e-01 | 100.0% | 63.7% |
| 3250611 | 101.1.2.306 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPR2 | 0.57 | 43.0 | 3.93e-01 | 100.0% | 61.3% |
| 4527588 | 3755.1.1.25 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › H-kinase_dim | 0.51 | 42.0 | 3.13e-01 | 90.9% | 97.1% |