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IMGVR_UViG_3300026311_000146-3300026311-Ga0209723_100647319

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300026311_000146-3300026311-Ga0209723_100647319 ↗
Kingdom:: archaea

Quality

55.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 180-299

PDB

D2 medium residues 302-373

PDB

Domain cluster: representative

CATH (15)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1pwuA04	3.40.390.10	Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain)	0.79	66.0	4.59e-01	100.0%	29.4%
1qr0A01	3.90.470.20	Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain	0.59	51.0	4.28e-01	97.2%	92.8%
1y1uA03	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.57	43.0	3.71e-01	83.3%	94.3%
3s7zA01	3.40.50.1860	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.57	40.0	3.35e-01	72.2%	75.0%
3mopK00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.56	46.0	4.39e-01	100.0%	92.5%
4b0zA00	1.25.40.990	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.54	38.0	2.74e-01	73.6%	33.0%
5ko4A00	1.20.920.10	Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like	0.54	45.0	4.12e-01	100.0%	92.1%
2kebA00	1.10.8.530	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › DNA polymerase alpha-primase, subunit B, N-terminal domain	0.54	38.0	3.70e-01	79.2%	67.9%
3nb2A04	1.10.4140.10	Mainly Alpha › Orthogonal Bundle › effector protein (NleL) fold › effector protein (NleL)	0.53	45.0	3.52e-01	100.0%	84.7%
3ezhA00	1.20.120.960	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase NarX, sensor domain	0.53	38.0	3.36e-01	77.8%	90.4%
1e9fA00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.53	42.0	3.17e-01	90.3%	94.1%
3htvA02	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.53	39.0	3.05e-01	80.6%	63.1%
1ichA00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.52	44.0	4.19e-01	100.0%	94.3%
6n39A01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.52	36.0	2.72e-01	98.6%	26.5%
3h1nA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.50	37.0	3.13e-01	77.8%	50.8%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3372352	101.1.1.69 ↗	alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_7	0.63	38.0	3.87e-01	70.8%	62.9%
3191285	130.1.1.16 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Ish1	0.61	50.0	5.06e-01	90.3%	92.9%
3229527	234.3.1.0 ↗	a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain	0.61	51.0	3.96e-01	100.0%	86.1%
3929481	109.49.1.1 ↗	alpha superhelices › Repetitive alpha hairpins › Helical domain in acetyl-CoA carboxylase › Helical domain in acetyl-CoA carboxylase › ACC_central	0.59	40.0	2.86e-01	72.2%	86.8%
5054325	5060.2.1.0 ↗	alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain	0.54	38.0	3.30e-01	76.4%	85.8%
3784180	3416.1.1.1 ↗	a+b complex topology › Mediator co-activator domain 1 of Gal11/med15 › Mediator co-activator domain 1 of Gal11/med15 › Mediator co-activator domain 1 of Gal11/med15 › Gal11_ABD1	0.54	39.0	3.77e-01	77.8%	89.4%
3636878	3444.1.1.0 ↗	alpha arrays › DP domain › DP domain › DP domain	0.54	42.0	4.14e-01	90.3%	91.4%
3775373	110.1.1.1 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death	0.53	43.0	3.93e-01	100.0%	75.5%
4932795	5060.2.1.0 ↗	alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain	0.53	37.0	3.24e-01	76.4%	89.2%
3648623	102.1.3.0 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain	0.51	42.0	3.80e-01	93.1%	76.0%
3238639	509.1.1.14 ↗	alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › ANIS5_cation-bd	0.51	36.0	3.79e-01	79.2%	84.6%