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IMGVR_UViG_3300026311_000153-3300026311-Ga0209723_10071676
Arc-VirIMGVR_UViG_3300026311_000153-3300026311-Ga0209723_10071676
Identity
- Kingdom:
- archaea
Quality
91.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-71
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18789.7 best | DarA_C | 32.1 | 1.90e-07 | 96.7% | 90.0% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e44A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.67 | 57.0 | 5.39e-01 | 100.0% | 100.0% |
| 1qltA03 | 3.40.462.10 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain | 0.66 | 57.0 | 3.85e-01 | 98.3% | 36.4% |
| 6c6uN00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.63 | 52.0 | 4.60e-01 | 100.0% | 84.7% |
| 2jsxA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.63 | 53.0 | 5.05e-01 | 96.7% | 95.8% |
| 3ajdA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.62 | 52.0 | 5.20e-01 | 93.3% | 100.0% |
| 4lvnP00 | 3.30.70.2380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 53.0 | 4.88e-01 | 100.0% | 95.1% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.62 | 52.0 | 4.61e-01 | 100.0% | 90.4% |
| 3m6uA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.62 | 52.0 | 4.70e-01 | 98.3% | 69.8% |
| 3u02A01 | 3.30.70.2200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 52.0 | 4.03e-01 | 100.0% | 62.5% |
| 5ao2B02 | 3.30.70.2760 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 51.0 | 4.51e-01 | 95.0% | 96.6% |
| 1wvfA03 | 3.40.462.10 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain | 0.60 | 48.0 | 3.34e-01 | 93.3% | 35.9% |
| 5k9fA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 49.0 | 4.24e-01 | 100.0% | 92.2% |
| 4dn9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 50.0 | 4.33e-01 | 100.0% | 87.6% |
| 2qswA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 48.0 | 4.35e-01 | 98.3% | 91.1% |
| 2hpuA02 | 3.30.70.2050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 38.0 | 3.75e-01 | 96.7% | 65.1% |
| 4erdA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 48.0 | 4.07e-01 | 100.0% | 80.6% |
| 4e4tA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.57 | 45.0 | 3.22e-01 | 90.0% | 51.0% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 48.0 | 4.14e-01 | 100.0% | 94.1% |
| 2yvsA02 | 3.30.70.2560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 4.55e-01 | 95.0% | 98.3% |
| 4hl9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 4.08e-01 | 100.0% | 96.8% |
| 3kkfA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 42.0 | 3.75e-01 | 100.0% | 84.8% |
| 4l1dC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 3.51e-01 | 91.7% | 84.4% |
| 4ph8A00 | 2.60.40.2910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 46.0 | 3.45e-01 | 100.0% | 57.3% |
| 3pv7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 3.69e-01 | 91.7% | 83.0% |
| 4wweA01 | 3.30.190.20 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribosomal protein L1/L10, rRNA-binding domain | 0.52 | 43.0 | 3.78e-01 | 100.0% | 76.2% |
| 1xauA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.51e-01 | 91.7% | 78.8% |
| 2qa1A02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 42.0 | 3.98e-01 | 100.0% | 96.2% |
| 6hoyA02 | 2.20.28.200 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.51 | 35.0 | 3.79e-01 | 93.3% | 87.8% |
| 5nslA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 37.0 | 2.29e-01 | 83.3% | 32.5% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3367433 | 244.1.1.26 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GUB_WAK_bind | 0.71 | 57.0 | 4.19e-01 | 100.0% | 32.4% |
| 4944201 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.68 | 56.0 | 5.38e-01 | 93.3% | 100.0% |
| 4110590 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.68 | 59.0 | 5.22e-01 | 100.0% | 83.3% |
| 3290932 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.67 | 48.0 | 5.19e-01 | 100.0% | 94.0% |
| 3188088 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.66 | 57.0 | 5.48e-01 | 100.0% | 98.6% |
| 3283098 | 304.169.1.3 ↗ | a+b two layers › Alpha-beta plaits › RspWYL1 C-terminal domain › RspWYL1 C-terminal domain › WCX | 0.66 | 56.0 | 5.04e-01 | 96.7% | 71.8% |
| 3383433 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.66 | 53.0 | 5.48e-01 | 98.3% | 100.0% |
| 4110651 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.66 | 55.0 | 4.19e-01 | 100.0% | 49.4% |
| 3738767 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.66 | 56.0 | 5.31e-01 | 100.0% | 89.3% |
| 4938113 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.65 | 55.0 | 5.16e-01 | 100.0% | 89.9% |
| 4934529 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.65 | 56.0 | 5.42e-01 | 100.0% | 97.1% |
| 5040370 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.65 | 55.0 | 5.31e-01 | 100.0% | 95.7% |
| 4419829 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.64 | 52.0 | 4.96e-01 | 96.7% | 89.3% |
| 5052042 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.64 | 55.0 | 4.91e-01 | 100.0% | 74.4% |
| 5037191 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.64 | 53.0 | 5.14e-01 | 98.3% | 100.0% |
| 5075371 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.63 | 54.0 | 4.81e-01 | 100.0% | 82.2% |
| 3617448 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.63 | 52.0 | 5.23e-01 | 93.3% | 96.7% |
| 3291713 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.63 | 52.0 | 5.06e-01 | 96.7% | 95.7% |
| 5080144 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.63 | 53.0 | 5.12e-01 | 100.0% | 94.3% |
| 3277862 | 304.120.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmL_1st | 0.63 | 52.0 | 5.26e-01 | 95.0% | 100.0% |
| 4998680 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.63 | 54.0 | 5.18e-01 | 100.0% | 97.1% |
| 5047084 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 53.0 | 4.83e-01 | 100.0% | 92.9% |
| 5036777 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.62 | 52.0 | 4.96e-01 | 100.0% | 89.3% |
| 4974988 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.62 | 52.0 | 5.07e-01 | 100.0% | 97.1% |
| 4984434 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.62 | 52.0 | 5.10e-01 | 98.3% | 100.0% |
| 3640364 | 4956.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.62 | 51.0 | 4.80e-01 | 95.0% | 96.0% |
| 5043379 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.62 | 51.0 | 4.99e-01 | 95.0% | 100.0% |
| 3697123 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 51.0 | 4.46e-01 | 100.0% | 96.0% |
| 4973973 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 52.0 | 5.03e-01 | 100.0% | 97.1% |
| 5061669 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.61 | 51.0 | 4.60e-01 | 100.0% | 68.9% |
| 5041665 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.61 | 50.0 | 4.85e-01 | 98.3% | 100.0% |
| 4960289 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.61 | 50.0 | 4.50e-01 | 98.3% | 93.3% |
| 5077439 | 304.130.1.0 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain | 0.60 | 52.0 | 4.99e-01 | 100.0% | 95.7% |
| 3684388 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.60 | 50.0 | 4.85e-01 | 100.0% | 90.0% |
| 3362483 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.60 | 50.0 | 4.88e-01 | 100.0% | 97.1% |
| 5022463 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 47.0 | 4.68e-01 | 93.3% | 98.5% |
| 3174687 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.59 | 47.0 | 4.42e-01 | 90.0% | 86.7% |
| 1953118 | 244.1.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase | 0.59 | 50.0 | 4.09e-01 | 100.0% | 95.0% |
| 3510937 | 1.1.7.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th | 0.58 | 46.0 | 3.84e-01 | 86.7% | 70.5% |
| 3309654 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.58 | 48.0 | 4.67e-01 | 100.0% | 94.3% |
| 5041314 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.58 | 47.0 | 4.73e-01 | 96.7% | 96.7% |
| 3730502 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.57 | 48.0 | 4.33e-01 | 100.0% | 97.8% |
| 4958616 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.57 | 47.0 | 4.46e-01 | 100.0% | 98.7% |
| 3726838 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.57 | 49.0 | 4.19e-01 | 100.0% | 60.0% |
| 1039103 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.56 | 45.0 | 4.08e-01 | 100.0% | 95.8% |
| 3803482 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.55 | 44.0 | 4.30e-01 | 96.7% | 98.6% |
| 3699695 | 3792.1.1.0 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain | 0.55 | 46.0 | 3.87e-01 | 100.0% | 52.7% |
| 3219455 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.55 | 46.0 | 3.77e-01 | 100.0% | 98.4% |
| 3919017 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.55 | 42.0 | 3.42e-01 | 85.0% | 83.3% |
| 3461080 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 45.0 | 3.56e-01 | 100.0% | 55.0% |
| 4944441 | 309.1.2.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain | 0.53 | 43.0 | 3.35e-01 | 100.0% | 62.5% |
| 3267620 | 11.1.5.62 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM49 | 0.53 | 43.0 | 3.68e-01 | 100.0% | 63.2% |
| 3488755 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 40.0 | 3.65e-01 | 90.0% | 89.4% |
D2
high
residues 79-125
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3t7lA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.79 | 62.0 | 5.36e-01 | 87.2% | 67.6% |
| 3gv4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.72 | 60.0 | 4.76e-01 | 95.7% | 50.5% |
| 1wgmA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.72 | 58.0 | 5.08e-01 | 93.6% | 84.9% |
| 2bayE00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.71 | 57.0 | 5.38e-01 | 91.5% | 94.9% |
| 3ihpA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.71 | 59.0 | 4.49e-01 | 95.7% | 43.1% |
| 4uf0A03 | 2.10.110.20 | Mainly Beta › Ribbon › Cysteine Rich Protein › | 0.71 | 63.0 | 5.67e-01 | 100.0% | 89.2% |
| 3lrqB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.71 | 58.0 | 4.92e-01 | 93.6% | 75.0% |
| 3mhsA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.68 | 57.0 | 4.28e-01 | 100.0% | 50.4% |
| 2co8A00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.67 | 51.0 | 4.33e-01 | 85.1% | 54.9% |
| 4wz0A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.67 | 56.0 | 4.40e-01 | 100.0% | 72.5% |
| 3ol2B02 | 3.30.1680.10 | Alpha Beta › 2-Layer Sandwich › ligand-binding face of the semaphorins, domain 2 › ligand-binding face of the semaphorins, domain 2 | 0.64 | 42.0 | 4.20e-01 | 97.9% | 66.7% |
| 3ddtC00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.62 | 48.0 | 4.98e-01 | 89.4% | 95.5% |
| 7q5yG01 | 3.10.20.740 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.62 | 43.0 | 3.42e-01 | 74.5% | 46.5% |
| 1wemA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 43.0 | 3.81e-01 | 78.7% | 69.7% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 46.0 | 4.26e-01 | 89.4% | 90.9% |
| 3cr8C02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 49.0 | 3.34e-01 | 95.7% | 68.7% |
| 2ma6A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 47.0 | 4.38e-01 | 91.5% | 86.9% |
| 1jhdA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 46.0 | 3.11e-01 | 95.7% | 77.3% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 45.0 | 4.23e-01 | 89.4% | 91.5% |
| 1e3hA01 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.54 | 41.0 | 2.74e-01 | 89.4% | 71.8% |
| 2ll3A00 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.51 | 43.0 | 3.83e-01 | 100.0% | 97.1% |
| 1gmnA01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.51 | 43.0 | 3.59e-01 | 100.0% | 95.5% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4280250 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.86 | 68.0 | 4.59e-01 | 91.5% | 24.8% |
| 3718397 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.85 | 59.0 | 6.56e-01 | 72.3% | 100.0% |
| 4322808 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.83 | 66.0 | 4.46e-01 | 91.5% | 24.3% |
| 3173010 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.82 | 71.0 | 6.26e-01 | 97.9% | 78.6% |
| 3720371 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.82 | 63.0 | 6.48e-01 | 85.1% | 100.0% |
| 4190899 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.80 | 66.0 | 4.44e-01 | 91.5% | 27.1% |
| 4156850 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.80 | 62.0 | 4.26e-01 | 91.5% | 24.8% |
| 4283064 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.80 | 66.0 | 4.49e-01 | 93.6% | 26.6% |
| 4542598 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.79 | 65.0 | 4.40e-01 | 93.6% | 26.1% |
| 4511254 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.79 | 64.0 | 4.43e-01 | 93.6% | 26.9% |
| 3485409 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.79 | 56.0 | 5.98e-01 | 76.6% | 92.5% |
| 4109359 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.78 | 61.0 | 4.22e-01 | 91.5% | 25.6% |
| 4463023 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.77 | 62.0 | 4.25e-01 | 91.5% | 26.5% |
| 4946420 | 376.1.1.180 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ResIII | 0.76 | 62.0 | 5.66e-01 | 93.6% | 92.3% |
| 4592462 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.76 | 62.0 | 4.22e-01 | 93.6% | 25.3% |
| 4991688 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.76 | 61.0 | 5.90e-01 | 89.4% | 94.3% |
| 4537743 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.76 | 59.0 | 4.11e-01 | 93.6% | 25.6% |
| 4377367 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.75 | 60.0 | 4.15e-01 | 91.5% | 26.1% |
| 4322209 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.75 | 60.0 | 4.14e-01 | 91.5% | 26.1% |
| 3264726 | 376.1.1.32 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP_var | 0.74 | 62.0 | 4.70e-01 | 93.6% | 44.5% |
| 3998594 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.74 | 60.0 | 5.18e-01 | 91.5% | 81.3% |
| 3172593 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.74 | 64.0 | 4.70e-01 | 100.0% | 53.8% |
| 3439077 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.74 | 64.0 | 5.09e-01 | 97.9% | 56.8% |
| 4297182 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.74 | 62.0 | 4.19e-01 | 93.6% | 26.5% |
| 1835651 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.74 | 58.0 | 5.22e-01 | 91.5% | 62.7% |
| 3689756 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.73 | 61.0 | 4.34e-01 | 93.6% | 53.1% |
| 4218517 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.73 | 49.0 | 5.48e-01 | 70.2% | 100.0% |
| 3405724 | 376.1.1.32 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP_var | 0.72 | 60.0 | 4.51e-01 | 95.7% | 40.8% |
| 3427984 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.71 | 60.0 | 4.87e-01 | 97.9% | 56.8% |
| 3782443 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.71 | 59.0 | 4.16e-01 | 100.0% | 40.0% |
| 4563368 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 53.0 | 3.09e-01 | 83.0% | 9.5% |
| 4645746 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.71 | 57.0 | 3.89e-01 | 95.7% | 24.9% |
| 3936791 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.70 | 58.0 | 4.87e-01 | 95.7% | 80.0% |
| 3741205 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.70 | 58.0 | 4.60e-01 | 97.9% | 54.3% |
| 2409922 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.70 | 53.0 | 4.41e-01 | 83.0% | 59.5% |
| 3230559 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 49.0 | 5.23e-01 | 76.6% | 90.0% |
| 4947644 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 47.0 | 4.42e-01 | 72.3% | 83.3% |
| 3185361 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.69 | 58.0 | 4.57e-01 | 97.9% | 54.3% |
| 3397204 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.69 | 59.0 | 4.71e-01 | 100.0% | 70.0% |
| 3706822 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.69 | 56.0 | 5.43e-01 | 95.7% | 92.7% |
| 3525671 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.69 | 55.0 | 5.12e-01 | 91.5% | 95.0% |
| 3848784 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.69 | 54.0 | 4.42e-01 | 91.5% | 60.0% |
| 3501562 | 376.1.1.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ | 0.68 | 55.0 | 5.43e-01 | 93.6% | 100.0% |
| 4310980 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.68 | 54.0 | 3.82e-01 | 93.6% | 27.9% |
| 3366410 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.67 | 51.0 | 3.97e-01 | 87.2% | 47.8% |
| 3739776 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.67 | 52.0 | 4.62e-01 | 91.5% | 76.0% |
| 3273034 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.67 | 57.0 | 4.75e-01 | 100.0% | 56.5% |
| 3712859 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.66 | 47.0 | 4.97e-01 | 74.5% | 92.5% |
| 3221156 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.66 | 50.0 | 4.85e-01 | 87.2% | 98.2% |
| 3608692 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.66 | 49.0 | 4.24e-01 | 87.2% | 78.3% |
| 3346269 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.65 | 49.0 | 4.12e-01 | 87.2% | 67.8% |
| 3707286 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.65 | 48.0 | 4.63e-01 | 83.0% | 89.1% |
| 3858618 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 52.0 | 4.51e-01 | 95.7% | 92.5% |
| 3994024 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 49.0 | 4.42e-01 | 87.2% | 71.4% |
| 3224677 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.64 | 44.0 | 4.22e-01 | 76.6% | 83.3% |
| 3876455 | 376.1.1.78 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Zf_2nd_IFT121 | 0.64 | 46.0 | 4.43e-01 | 78.7% | 83.6% |
| 3217012 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.64 | 49.0 | 3.48e-01 | 91.5% | 43.0% |
| 3212037 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.63 | 48.0 | 4.36e-01 | 89.4% | 80.0% |
| 3787741 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 51.0 | 4.83e-01 | 95.7% | 85.0% |
| 3380774 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.61 | 44.0 | 4.09e-01 | 80.9% | 74.6% |
| 3400502 | 376.1.2.12 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › zf-RING_2 | 0.59 | 43.0 | 3.96e-01 | 83.0% | 83.1% |
| 3220000 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.53 | 47.0 | 3.65e-01 | 100.0% | 98.0% |