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IMGVR_UViG_3300026311_000153-3300026311-Ga0209723_10071677

Arc-Vir

IMGVR_UViG_3300026311_000153-3300026311-Ga0209723_10071677

Quality

87.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-139
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00589.28 best Phage_integrase 69.7 3.70e-19 100.0% 67.4%
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a8eA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.91 83.0 7.06e-01 100.0% 63.7%
3nkhA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.87 83.0 6.55e-01 100.0% 67.4%
2a3vA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.85 81.0 6.48e-01 100.0% 72.0%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.83 78.0 6.78e-01 100.0% 69.9%
1aihA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.83 64.0 5.57e-01 100.0% 55.9%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.83 78.0 6.50e-01 100.0% 65.5%
1ae9A00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.81 75.0 6.51e-01 100.0% 67.8%
4acoA02 1.10.443.20 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Centromere DNA-binding protein complex CBF3 subunit, domain 2 0.80 75.0 5.27e-01 100.0% 47.7%
2bm0A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.55 21.0 3.04e-01 88.2% 76.5%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 4.15e-01 100.0% 78.0%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 4.13e-01 100.0% 75.0%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.89e-01 100.0% 63.7%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.98e-01 100.0% 69.3%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.98e-01 100.0% 75.0%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 43.0 4.25e-01 100.0% 85.0%
1p4xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 43.0 4.30e-01 100.0% 88.6%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 4.11e-01 100.0% 79.6%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.63e-01 97.5% 65.5%
2nnnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 4.02e-01 100.0% 79.5%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 4.02e-01 100.0% 77.5%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.96e-01 91.6% 90.0%
3bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.80e-01 100.0% 71.9%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 39.0 3.81e-01 100.0% 73.7%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5028332 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.94 85.0 8.35e-01 100.0% 88.8%
4966682 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.94 84.0 8.63e-01 100.0% 96.5%
4964228 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.93 85.0 8.06e-01 100.0% 83.0%
4580960 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.93 89.0 8.33e-01 100.0% 87.9%
4387164 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.93 89.0 8.58e-01 100.0% 93.8%
5029991 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.92 82.0 8.09e-01 100.0% 88.0%
5037644 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.92 80.0 8.00e-01 100.0% 89.2%
4285602 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.92 86.0 8.30e-01 100.0% 89.2%
5030307 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.92 83.0 8.19e-01 100.0% 89.6%
4120466 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.92 88.0 8.40e-01 100.0% 89.6%
5016957 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 88.0 7.49e-01 100.0% 70.3%
4637388 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 77.0 6.66e-01 100.0% 61.2%
4936284 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 78.0 8.01e-01 100.0% 92.2%
4112553 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 88.0 8.08e-01 100.0% 88.3%
4278298 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 88.0 8.33e-01 100.0% 88.9%
5010452 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.91 78.0 8.15e-01 100.0% 96.4%
4042318 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 87.0 8.26e-01 100.0% 91.9%
3588206 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 87.0 7.88e-01 100.0% 88.0%
5016981 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.90 78.0 7.86e-01 100.0% 89.2%
4153666 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 86.0 8.16e-01 100.0% 88.1%
4200953 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 85.0 7.66e-01 100.0% 90.3%
4952765 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 86.0 8.05e-01 100.0% 87.1%
5058465 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 78.0 7.65e-01 100.0% 86.4%
3943512 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 85.0 8.08e-01 100.0% 91.1%
4996190 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 85.0 8.32e-01 100.0% 94.4%
5059725 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 80.0 6.81e-01 100.0% 62.2%
3588110 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 85.0 7.99e-01 100.0% 95.0%
3942448 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 84.0 7.70e-01 100.0% 96.0%
4313957 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 85.0 8.09e-01 100.0% 94.8%
3964552 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 85.0 8.07e-01 100.0% 89.6%
4118349 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 84.0 8.02e-01 100.0% 87.4%
4071300 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 85.0 8.08e-01 100.0% 94.1%
4380833 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 75.0 6.60e-01 100.0% 63.6%
4975762 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 82.0 8.05e-01 100.0% 91.2%
5052541 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 81.0 8.01e-01 100.0% 91.2%
4930303 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 76.0 7.75e-01 100.0% 92.2%
4192665 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 84.0 8.40e-01 100.0% 97.5%
4314510 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 75.0 7.81e-01 100.0% 95.5%
3590354 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 84.0 8.02e-01 100.0% 91.9%
4960057 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 84.0 7.88e-01 100.0% 88.6%
4973226 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 77.0 7.70e-01 100.0% 90.0%
4979786 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 76.0 7.66e-01 100.0% 89.2%
3958910 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.88 84.0 7.87e-01 100.0% 90.0%
5032561 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 72.0 7.62e-01 100.0% 96.2%
4981577 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 78.0 7.70e-01 100.0% 88.8%
4994277 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 80.0 6.82e-01 100.0% 63.3%
5054951 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 82.0 7.94e-01 100.0% 89.2%
4180367 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 84.0 7.34e-01 100.0% 89.7%
5083506 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.88 84.0 7.02e-01 100.0% 65.9%
4082783 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 83.0 7.38e-01 100.0% 85.6%
4954764 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 69.0 7.31e-01 97.5% 92.4%
4929009 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 84.0 8.09e-01 100.0% 91.5%
4166118 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 83.0 7.91e-01 100.0% 92.6%
4428937 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 77.0 7.76e-01 100.0% 92.5%
5083877 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 81.0 7.73e-01 100.0% 85.9%
3969558 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.87 82.0 7.85e-01 100.0% 88.1%
5035582 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.87 73.0 7.49e-01 100.0% 91.3%
4357768 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.87 79.0 7.61e-01 100.0% 86.9%
4463631 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 82.0 7.84e-01 100.0% 91.9%
4338286 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 81.0 7.76e-01 100.0% 87.4%
4475168 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 82.0 6.78e-01 100.0% 62.6%
5080069 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 80.0 8.02e-01 100.0% 96.7%
4932090 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 80.0 7.87e-01 100.0% 92.8%
4044870 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 82.0 7.81e-01 100.0% 88.1%
3589779 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 83.0 7.52e-01 100.0% 93.3%
4522024 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 82.0 7.47e-01 100.0% 94.7%
4095013 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 82.0 7.78e-01 100.0% 90.4%
4969226 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 80.0 7.61e-01 100.0% 85.9%
4122043 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 77.0 7.67e-01 100.0% 93.3%
4004713 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 80.0 7.59e-01 100.0% 85.9%
4210863 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 77.0 7.50e-01 100.0% 86.9%
4032881 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.86 81.0 7.75e-01 100.0% 88.9%
5052502 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 81.0 7.71e-01 100.0% 89.6%
4093657 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 81.0 7.71e-01 100.0% 88.9%
4134015 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 81.0 7.32e-01 100.0% 94.8%
4004483 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 80.0 6.72e-01 100.0% 63.2%
5083074 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 81.0 7.40e-01 100.0% 90.7%
184514 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 81.0 7.21e-01 100.0% 96.2%
3943153 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 80.0 7.75e-01 100.0% 92.3%
5081700 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 81.0 7.09e-01 100.0% 89.1%
4137254 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.85 81.0 7.25e-01 100.0% 92.9%
3964227 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 79.0 7.62e-01 98.3% 92.3%
3964171 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 75.0 6.51e-01 100.0% 64.4%
3978568 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 77.0 7.39e-01 100.0% 85.9%
4962932 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 80.0 7.01e-01 100.0% 79.4%
4034370 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 76.0 7.60e-01 100.0% 95.0%
3945160 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.84 80.0 7.71e-01 100.0% 92.3%
4680466 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.84 69.0 6.91e-01 100.0% 85.8%
4392937 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.83 69.0 6.29e-01 100.0% 67.1%
3589872 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 78.0 7.17e-01 100.0% 91.3%
5008464 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 74.0 6.19e-01 97.5% 59.5%
4959043 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 78.0 7.57e-01 100.0% 98.5%
4931987 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 72.0 7.47e-01 98.3% 98.2%
4034079 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 75.0 7.15e-01 96.6% 91.9%
3587645 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.81 77.0 7.31e-01 100.0% 94.8%
4966032 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.81 76.0 7.28e-01 100.0% 96.3%
3965072 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.81 75.0 7.31e-01 99.2% 94.6%
4410774 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.79 66.0 6.69e-01 100.0% 90.4%
5011490 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 75.0 6.81e-01 100.0% 88.0%
D2 medium residues 140-195
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00589.28 best Phage_integrase 57.5 2.20e-15 98.2% 26.2%