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IMGVR_UViG_3300026311_000663-3300026311-Ga0209723_100130213
Arc-VirIMGVR_UViG_3300026311_000663-3300026311-Ga0209723_100130213
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-15_138-200
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b25A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 44.0 | 3.37e-01 | 100.0% | 37.9% |
| 1vbkA03 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 38.0 | 3.23e-01 | 100.0% | 45.9% |
| 4e12A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 43.0 | 3.27e-01 | 100.0% | 37.8% |
| 1f21A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 44.0 | 3.63e-01 | 100.0% | 78.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5049682 | 2484.1.1.264 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF3800 | 0.68 | 63.0 | 4.50e-01 | 100.0% | 71.0% |
| 4022107 | 2003.1.5.94 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF4470 | 0.57 | 50.0 | 3.31e-01 | 100.0% | 29.9% |
| 3998869 | 2007.9.1.12 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TRAPPC10_1st | 0.54 | 37.0 | 2.87e-01 | 100.0% | 29.7% |
| 4347789 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.53 | 39.0 | 2.62e-01 | 80.8% | 33.2% |
| 5017854 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.53 | 40.0 | 2.64e-01 | 100.0% | 18.8% |
| 3731197 | 2007.2.3.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase3 | 0.51 | 41.0 | 2.92e-01 | 93.6% | 81.7% |
| 3722983 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.51 | 41.0 | 3.36e-01 | 100.0% | 47.6% |
| 3822981 | 2004.1.1.51 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_1 | 0.51 | 40.0 | 2.73e-01 | 91.0% | 70.9% |
| 223631 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.51 | 44.0 | 3.29e-01 | 100.0% | 64.9% |
| 4206410 | 2493.1.1.4 ↗ | a/b three-layered sandwiches › MurF and HprK N-domain-like › MurF and HprK N-domain-like › MurF and HprK N-domain-like › DRTGG | 0.50 | 36.0 | 3.18e-01 | 100.0% | 50.0% |
D2
medium
residues 16-137_201-250
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12686.13 best | DUF3800 | 39.0 | 1.80e-09 | 82.0% | 89.9% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 26.0 | 3.72e-01 | 72.1% | 84.5% |
| 8dq6A01 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.59 | 32.0 | 4.09e-01 | 83.1% | 90.0% |
| 4dh4A00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.58 | 31.0 | 3.81e-01 | 83.1% | 79.8% |
| 2mzwA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.56 | 23.0 | 3.42e-01 | 72.1% | 86.8% |
| 5ajiB03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 28.0 | 3.63e-01 | 91.9% | 87.4% |
| 3mekA04 | 1.25.40.970 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 27.0 | 3.67e-01 | 90.1% | 98.8% |
| 2k3iA01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 25.0 | 3.46e-01 | 80.8% | 90.6% |