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IMGVR_UViG_3300026311_000663-3300026311-Ga0209723_100130267

Arc-Vir

IMGVR_UViG_3300026311_000663-3300026311-Ga0209723_100130267

Quality

78.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-54
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nscA01 3.30.70.1050 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain 0.77 46.0 3.93e-01 70.6% 38.5%
4g6tB00 6.10.20.120 Special › Helix non-globular › Arc Repressor Mutant, subunit A › 0.61 47.0 4.39e-01 92.2% 66.2%
1xexB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 43.0 3.13e-01 84.3% 62.7%
2xzm901 6.20.50.180 Special › Other non-globular › N-terminal domain of TfIIb › 0.54 45.0 4.04e-01 94.1% 100.0%
4arvA02 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.54 39.0 3.09e-01 84.3% 67.5%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3407049 386.1.1.20 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.65 43.0 4.13e-01 72.5% 58.3%
3438405 386.1.1.310 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF1677 0.60 49.0 4.47e-01 90.2% 89.9%
3272982 102.1.1.24 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.56 45.0 3.13e-01 94.1% 57.9%
4141047 593.1.1.0 alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like 0.53 42.0 2.73e-01 90.2% 39.6%