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IMGVR_UViG_3300026363_000034-3300026363-Ga0255363_1003542
Arc-VirIMGVR_UViG_3300026363_000034-3300026363-Ga0255363_1003542
Identity
- Kingdom:
- archaea
Quality
54.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-68
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gp4B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.84 | 64.0 | 5.02e-01 | 100.0% | 40.8% |
| 4r7eA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 30.0 | 2.99e-01 | 90.9% | 43.5% |
| 3oc4B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 44.0 | 3.30e-01 | 92.4% | 88.5% |
| 5gu7C01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 46.0 | 3.78e-01 | 97.0% | 61.0% |
| 2c20A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 45.0 | 3.26e-01 | 98.5% | 89.7% |
| 3cexA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.51 | 40.0 | 3.15e-01 | 95.5% | 88.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3631300 | 3054.1.1.0 ↗ | alpha arrays › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol | 0.59 | 39.0 | 3.22e-01 | 100.0% | 35.4% |
| 3555085 | 376.1.1.26 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_4 | 0.53 | 30.0 | 2.62e-01 | 95.5% | 34.0% |
| 3995127 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.53 | 44.0 | 4.29e-01 | 93.9% | 96.0% |
| 3479163 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 43.0 | 3.63e-01 | 100.0% | 59.2% |
| 3988541 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.52 | 42.0 | 4.17e-01 | 86.4% | 98.5% |
| 3871082 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.52 | 42.0 | 3.43e-01 | 100.0% | 56.7% |
| 167917 | 620.1.1.6 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB_2 | 0.51 | 40.0 | 3.15e-01 | 95.5% | 88.8% |
D2
medium
residues 76-158
D3
medium
residues 197-211_234-293