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IMGVR_UViG_3300026470_001400-3300026470-Ga0247599_10022854

Arc-Vir

IMGVR_UViG_3300026470_001400-3300026470-Ga0247599_10022854

Quality

87.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-47
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00266.26 best Aminotran_5 31.2 1.60e-07 55.3% 6.7%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jf9A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.82 56.0 3.95e-01 72.3% 24.5%
3n98A01 3.20.110.10 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain 0.51 41.0 2.47e-01 95.7% 56.0%
6ui4A03 1.20.5.4820 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.51 40.0 3.45e-01 95.7% 93.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.91 83.0 4.83e-01 100.0% 14.1%
None 0.87 77.0 4.54e-01 100.0% 14.5%
4530298 7577.1.1.3 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 0.86 76.0 4.39e-01 100.0% 11.6%
3517893 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.53 42.0 2.74e-01 100.0% 18.4%
4428918 376.1.1.37 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C 0.53 35.0 3.15e-01 91.5% 49.2%