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IMGVR_UViG_3300026512_000687-3300026512-Ga0256842_10072812
Arc-VirIMGVR_UViG_3300026512_000687-3300026512-Ga0256842_10072812
Identity
- Kingdom:
- archaea
Quality
83.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-78
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5gxxA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.80 | 55.0 | 3.22e-01 | 71.2% | 10.1% |
| 3ug9A02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.67 | 46.0 | 3.17e-01 | 74.6% | 20.4% |
| 4gycA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.67 | 53.0 | 3.64e-01 | 89.8% | 45.5% |
| 1ax8A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.65 | 53.0 | 4.13e-01 | 91.5% | 67.7% |
| 2j4bB00 | 1.25.40.500 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain | 0.64 | 45.0 | 3.57e-01 | 76.3% | 66.9% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.62 | 53.0 | 3.21e-01 | 100.0% | 93.1% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.57 | 45.0 | 3.32e-01 | 91.5% | 75.7% |
| 2kxpA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.55 | 40.0 | 3.43e-01 | 81.4% | 60.7% |
| 1q2zA00 | 1.25.40.240 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ku, C-terminal domain | 0.54 | 45.0 | 3.69e-01 | 98.3% | 83.3% |
| 3a9zA02 | 1.10.260.50 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.53 | 44.0 | 3.79e-01 | 100.0% | 58.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3926537 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 58.0 | 3.88e-01 | 100.0% | 74.2% |
| 4983855 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.64 | 53.0 | 3.60e-01 | 91.5% | 73.7% |
| 3331938 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.61 | 39.0 | 3.55e-01 | 71.2% | 46.3% |
| 3877335 | 109.4.1.1419 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27567 | 0.61 | 53.0 | 3.24e-01 | 100.0% | 68.1% |
| 3376868 | 109.4.1.177 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cnd3 | 0.55 | 45.0 | 2.51e-01 | 100.0% | 18.1% |
| 3537886 | 109.4.1.1419 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27567 | 0.55 | 46.0 | 3.12e-01 | 100.0% | 88.6% |
| 3772039 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 42.0 | 3.04e-01 | 89.8% | 37.0% |
| 3955621 | 603.5.1.33 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › SLAC1 | 0.54 | 46.0 | 3.32e-01 | 91.5% | 74.2% |
| 4966215 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 3.18e-01 | 100.0% | 61.2% |