←Back to structures

IMGVR_UViG_3300026536_000006-3300026536-Ga0209058_100762811

Arc-Vir

IMGVR_UViG_3300026536_000006-3300026536-Ga0209058_100762811

Identity

Kingdom:
archaea

Quality

73.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-70
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1i24A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.73 43.0 2.81e-01 77.2% 14.0%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 53.0 3.95e-01 82.5% 35.0%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 61.0 4.78e-01 98.2% 51.4%
2f9aA01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.65 47.0 2.79e-01 77.2% 10.9%
1d0xA04 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.63 54.0 3.91e-01 89.5% 61.3%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 39.0 3.15e-01 78.9% 35.8%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.13e-01 78.9% 39.7%
1tedA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 35.0 2.75e-01 71.9% 28.9%
4jaqA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 35.0 2.75e-01 71.9% 29.7%
3euoA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 34.0 2.63e-01 71.9% 31.8%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3177406 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 64.0 4.54e-01 82.5% 32.3%
3594965 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.75 60.0 4.39e-01 100.0% 34.3%
3808578 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.71 48.0 4.33e-01 70.2% 54.1%
139092 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.71 40.0 2.38e-01 71.9% 7.7%
3606980 2484.1.1.300 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Aminotran_1_2 0.71 49.0 3.47e-01 71.9% 24.8%
3896583 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.69 47.0 3.26e-01 71.9% 22.9%
3530014 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.67 58.0 3.25e-01 94.7% 12.8%
4083451 192.2.1.20 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ASNSD1-SEP 0.65 53.0 4.65e-01 89.5% 61.3%
3307706 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.64 43.0 3.25e-01 70.2% 28.6%
4959083 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 54.0 3.88e-01 98.2% 62.4%
3319227 1021.1.1.2 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD 0.62 45.0 4.15e-01 84.2% 61.4%
3469650 101.1.2.245 ↗ alpha arrays › HTH › HTH › winged helix domain › PORR 0.54 44.0 2.84e-01 93.0% 38.3%
3929748 109.4.1.1303 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_PRP39_N, HAT_PRP39_C 0.52 44.0 2.74e-01 98.2% 21.6%