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IMGVR_UViG_3300026625_000003-3300026625-Ga0208028_10000433
Arc-VirIMGVR_UViG_3300026625_000003-3300026625-Ga0208028_10000433
Identity
- Kingdom:
- archaea
Quality
76.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 43-149
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.59 | 36.0 | 4.23e-01 | 100.0% | 89.2% |
| 1dfaA03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.58 | 35.0 | 3.70e-01 | 96.3% | 67.4% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 33.0 | 3.57e-01 | 81.3% | 69.7% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 34.0 | 3.53e-01 | 87.9% | 66.7% |
| 4e98C00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 33.0 | 3.42e-01 | 82.2% | 63.8% |
| 6gdxA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 34.0 | 3.42e-01 | 84.1% | 65.4% |
| 1p1lA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.31e-01 | 82.2% | 64.7% |
| 1gqeA02 | 3.30.70.1660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 35.0 | 3.22e-01 | 71.0% | 68.3% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 28.0 | 3.30e-01 | 99.1% | 78.9% |
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.27e-01 | 82.2% | 63.2% |
| 4z9eA00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.51 | 30.0 | 3.27e-01 | 72.0% | 71.8% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3740450 | 328.1.1.3 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 | 0.64 | 36.0 | 3.92e-01 | 71.0% | 66.7% |
| 4629521 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.55 | 34.0 | 3.48e-01 | 82.2% | 63.5% |
| 5030026 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.55 | 38.0 | 4.08e-01 | 84.1% | 84.4% |
| 5030500 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.54 | 40.0 | 3.72e-01 | 84.1% | 59.3% |
| 3173026 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.54 | 44.0 | 3.84e-01 | 90.7% | 76.6% |
| 4937786 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.54 | 34.0 | 3.49e-01 | 82.2% | 66.0% |
| 4993856 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.54 | 40.0 | 4.11e-01 | 85.0% | 81.0% |
| 5040667 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.54 | 33.0 | 3.45e-01 | 82.2% | 64.1% |
| 5022277 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.54 | 40.0 | 3.76e-01 | 84.1% | 63.8% |
| 4957224 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.53 | 33.0 | 3.43e-01 | 82.2% | 66.0% |
| 5038160 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.53 | 34.0 | 3.57e-01 | 84.1% | 70.0% |
| 4538250 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.52 | 38.0 | 3.56e-01 | 86.9% | 61.5% |
| 4127810 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.52 | 41.0 | 4.00e-01 | 94.4% | 78.3% |
| 5015958 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.52 | 34.0 | 3.44e-01 | 87.9% | 67.3% |
| 5032338 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.52 | 42.0 | 4.06e-01 | 89.7% | 78.3% |
| 4803119 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.51 | 33.0 | 3.38e-01 | 84.1% | 66.3% |
| 3715218 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 36.0 | 3.16e-01 | 73.8% | 84.4% |
| 4940944 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.51 | 36.0 | 3.47e-01 | 84.1% | 63.2% |