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IMGVR_UViG_3300026625_000064-3300026625-Ga0208028_1000943
Arc-VirIMGVR_UViG_3300026625_000064-3300026625-Ga0208028_1000943
Identity
- Kingdom:
- archaea
Quality
77.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 116-242
D2
high
residues 246-362_573-585
Domain cluster:
rep: IMGVR_UViG_2860317346_000001-2860317346-2860319217__D48-148_320-330
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10102.15 best | DUF2341 | 32.3 | 1.50e-07 | 45.4% | 56.0% |
D3
medium
residues 368-407_428-449_463-497_543-561
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bq2D01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.63 | 59.0 | 4.89e-01 | 100.0% | 92.1% |
| 5iu1B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.62 | 26.0 | 2.65e-01 | 89.7% | 39.3% |
| 3ewkA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 25.0 | 2.66e-01 | 87.9% | 41.7% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.59 | 25.0 | 3.72e-01 | 88.8% | 95.7% |
| 1hn0A01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.58 | 53.0 | 4.56e-01 | 100.0% | 79.3% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 23.0 | 3.14e-01 | 89.7% | 72.7% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.53 | 39.0 | 3.71e-01 | 76.7% | 90.7% |
| 3ugfB02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.52 | 47.0 | 4.09e-01 | 100.0% | 97.7% |
| 1e5tA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 38.0 | 2.74e-01 | 80.2% | 78.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4988390 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.63 | 26.0 | 2.78e-01 | 88.8% | 41.9% |
| 4551342 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.62 | 26.0 | 3.07e-01 | 88.8% | 54.1% |
| 1840644 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.62 | 26.0 | 2.65e-01 | 89.7% | 39.3% |
| 4958869 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.61 | 26.0 | 2.75e-01 | 88.8% | 42.9% |
| 4949077 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.55 | 24.0 | 2.58e-01 | 88.8% | 45.0% |
| 3425057 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.51 | 32.0 | 3.39e-01 | 89.7% | 71.0% |
D4
medium
residues 408-427_450-462_498-542_562-572
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 53.0 | 4.23e-01 | 97.8% | 85.8% |
| 2vy0B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 51.0 | 3.67e-01 | 100.0% | 88.6% |
| 6xofA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 50.0 | 3.66e-01 | 100.0% | 88.5% |
| 3h6qA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 37.0 | 3.08e-01 | 77.5% | 99.4% |