←Back to structures
IMGVR_UViG_3300026627_000017-3300026627-Ga0208548_1013431
Arc-VirIMGVR_UViG_3300026627_000017-3300026627-Ga0208548_1013431
Identity
- Kingdom:
- archaea
Quality
47.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-151_361-380
D2
high
residues 236-354
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5nz7A01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.66 | 46.0 | 3.31e-01 | 70.6% | 85.3% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.64 | 34.0 | 3.61e-01 | 78.2% | 56.5% |
| 4mjgA00 | 3.30.2030.30 | Alpha Beta › 2-Layer Sandwich › TBP-like › | 0.63 | 34.0 | 3.01e-01 | 79.0% | 35.0% |
| 8ew8A01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.62 | 56.0 | 4.48e-01 | 100.0% | 97.8% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.60 | 47.0 | 4.74e-01 | 88.2% | 81.1% |
| 3oblA00 | 2.40.128.450 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 42.0 | 4.12e-01 | 75.6% | 89.4% |
| 8ainB01 | 3.10.450.250 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor | 0.58 | 41.0 | 4.35e-01 | 73.1% | 94.3% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 41.0 | 4.19e-01 | 72.3% | 99.1% |
| 4agiA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.57 | 40.0 | 3.00e-01 | 71.4% | 95.2% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 29.0 | 3.70e-01 | 82.4% | 83.1% |
| 2y24A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 36.0 | 3.83e-01 | 73.1% | 72.9% |
| 1h6lA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 41.0 | 2.90e-01 | 75.6% | 83.0% |
| 1aqbA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 43.0 | 3.78e-01 | 84.0% | 68.6% |
| 3c6kA01 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.54 | 37.0 | 4.08e-01 | 80.7% | 88.3% |
| 1iucA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.53 | 43.0 | 3.23e-01 | 88.2% | 91.0% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 40.0 | 3.61e-01 | 79.0% | 70.4% |
| 7c38B01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.53 | 42.0 | 3.10e-01 | 84.9% | 94.6% |
| 8bddA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 39.0 | 2.74e-01 | 76.5% | 98.1% |
| 2p4oA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 43.0 | 3.23e-01 | 88.2% | 89.4% |
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.52 | 38.0 | 3.35e-01 | 76.5% | 88.7% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.51 | 42.0 | 3.70e-01 | 89.1% | 97.2% |
| 4qrlA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 38.0 | 3.96e-01 | 84.9% | 84.5% |
| 2g30A02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.51 | 39.0 | 4.00e-01 | 80.7% | 87.9% |
| 4gq1A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 43.0 | 3.12e-01 | 93.3% | 92.8% |
| 3al9A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 44.0 | 2.99e-01 | 97.5% | 53.0% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3616330 | 77.3.1.4 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF28998 | 0.69 | 36.0 | 3.50e-01 | 72.3% | 44.4% |
| 3640581 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.57 | 44.0 | 2.86e-01 | 80.7% | 93.7% |
| 4528716 | 3784.1.1.0 ↗ | a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related | 0.57 | 42.0 | 4.49e-01 | 89.1% | 89.5% |
| 3703106 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 42.0 | 2.44e-01 | 77.3% | 73.9% |
| 3850814 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.56 | 43.0 | 2.90e-01 | 81.5% | 91.9% |
| 3513816 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.55 | 43.0 | 2.83e-01 | 80.7% | 88.7% |
| 3759644 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.55 | 42.0 | 2.81e-01 | 81.5% | 75.8% |
| 5039683 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 49.0 | 3.40e-01 | 99.2% | 91.6% |
| 3600210 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 42.0 | 3.05e-01 | 82.4% | 88.8% |
| 3502483 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 49.0 | 3.29e-01 | 100.0% | 80.0% |
| 3410461 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 49.0 | 3.46e-01 | 100.0% | 91.0% |
| 3233720 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 46.0 | 3.36e-01 | 93.3% | 87.7% |
| 4355548 | 558.1.1.26 ↗ | alpha duplicates or obligate multimers › Lis-homology dimerization domain › Lis-homology dimerization domain › Lis-homology dimerization domain › WD40 | 0.53 | 48.0 | 3.23e-01 | 100.0% | 72.0% |
| 3415186 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.53 | 40.0 | 2.97e-01 | 82.4% | 74.9% |
| 5040209 | 5.1.4.87 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD | 0.53 | 48.0 | 3.24e-01 | 99.2% | 82.3% |
| 3777275 | 5.1.4.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 | 0.52 | 48.0 | 3.27e-01 | 100.0% | 75.8% |
| 3576412 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.52 | 42.0 | 3.05e-01 | 84.9% | 61.6% |
| 3939547 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 48.0 | 3.43e-01 | 100.0% | 77.9% |
| 3578232 | 77.3.1.4 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF28998 | 0.52 | 43.0 | 3.46e-01 | 89.1% | 49.8% |
| 3529118 | 5.1.4.111 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › HPS6 | 0.51 | 47.0 | 3.26e-01 | 99.2% | 89.1% |
| None | — | 0.51 | 46.0 | 3.11e-01 | 96.6% | 89.4% | |
| 4951279 | 206.1.1.14 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 | 0.51 | 36.0 | 2.49e-01 | 71.4% | 33.9% |
| 3579887 | 5.1.5.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_LRRK2 | 0.51 | 45.0 | 3.37e-01 | 95.0% | 82.8% |
| 3521736 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 45.0 | 3.28e-01 | 96.6% | 92.3% |
| 4191828 | 5.1.4.100 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N | 0.51 | 46.0 | 2.97e-01 | 100.0% | 79.3% |
| 4028624 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.51 | 38.0 | 2.87e-01 | 79.0% | 64.1% |
| 3631256 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.51 | 45.0 | 3.15e-01 | 96.6% | 62.4% |
| 3514791 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 42.0 | 2.99e-01 | 90.8% | 84.5% |
| 3512316 | 5.1.5.69 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nbas_N | 0.50 | 46.0 | 3.27e-01 | 100.0% | 93.3% |
| 3741358 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 43.0 | 3.43e-01 | 91.6% | 59.1% |
| 3999383 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.50 | 45.0 | 3.23e-01 | 96.6% | 74.2% |
| 3794752 | 5.1.3.222 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_LRRK2 | 0.50 | 45.0 | 3.08e-01 | 96.6% | 71.2% |
| 3239473 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.50 | 45.0 | 3.17e-01 | 95.8% | 88.1% |
| 3441598 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.50 | 43.0 | 3.18e-01 | 92.4% | 58.7% |