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IMGVR_UViG_3300026877_000045-3300026877-Ga0208314_1016699
Arc-VirIMGVR_UViG_3300026877_000045-3300026877-Ga0208314_1016699
Identity
- Kingdom:
- archaea
Quality
82.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-102
Domain cluster:
rep: IMGVR_UViG_3300031760_000087-3300031760-Ga0326513_1000014369__D3-96
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 44.0 | 4.75e-01 | 92.0% | 82.6% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.60 | 46.0 | 4.82e-01 | 94.0% | 88.2% |
| 2f7lA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.60 | 40.0 | 4.36e-01 | 84.0% | 81.2% |
| 3muuB02 | 2.60.40.2400 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C | 0.60 | 38.0 | 4.30e-01 | 79.0% | 86.3% |
| 3n40P04 | 2.60.40.2400 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C | 0.60 | 37.0 | 4.27e-01 | 79.0% | 86.3% |
| 3qwmA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 39.0 | 3.63e-01 | 74.0% | 53.5% |
| 4ozxA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 49.0 | 3.54e-01 | 90.0% | 67.7% |
| 2jvnA00 | 3.90.640.80 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.58 | 31.0 | 2.94e-01 | 88.0% | 40.5% |
| 2vrwB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 39.0 | 3.67e-01 | 71.0% | 65.3% |
| 3k1lA01 | 3.30.457.40 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.56 | 45.0 | 4.73e-01 | 91.0% | 93.5% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.56 | 39.0 | 3.87e-01 | 93.0% | 67.0% |
| 3gvzA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.56 | 51.0 | 3.76e-01 | 100.0% | 70.7% |
| 3g7gH00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.56 | 42.0 | 3.65e-01 | 80.0% | 83.6% |
| 3f6zB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.56 | 38.0 | 4.28e-01 | 71.0% | 100.0% |
| 4hhvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 38.0 | 3.82e-01 | 71.0% | 74.8% |
| 1ikpA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 44.0 | 3.43e-01 | 86.0% | 68.6% |
| 4gzvA00 | 2.40.128.490 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 | 0.55 | 43.0 | 3.87e-01 | 84.0% | 87.1% |
| 3dcxA00 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.55 | 42.0 | 4.00e-01 | 80.0% | 83.8% |
| 1bnkA00 | 3.10.300.10 | Alpha Beta › Roll › 3-methyladenine DNA Glycosylase; Chain A › Methylpurine-DNA glycosylase (MPG) | 0.54 | 42.0 | 3.37e-01 | 83.0% | 76.5% |
| 2dfkC02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 39.0 | 3.49e-01 | 75.0% | 70.2% |
| 4osnA00 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.54 | 38.0 | 3.76e-01 | 75.0% | 70.9% |
| 3ge2A00 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 39.0 | 4.11e-01 | 95.0% | 86.5% |
| 1hdhA02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.53 | 31.0 | 3.53e-01 | 78.0% | 76.6% |
| 3ap9A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 42.0 | 3.71e-01 | 87.0% | 83.4% |
| 6k5gA01 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.52 | 43.0 | 3.20e-01 | 91.0% | 96.6% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 32.0 | 3.77e-01 | 84.0% | 95.5% |
| 1vavA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.37e-01 | 93.0% | 89.2% |
| 8afoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 4.06e-01 | 95.0% | 89.8% |
| 2oqbA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 36.0 | 3.56e-01 | 73.0% | 82.4% |
| 1fnfA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.93e-01 | 89.0% | 86.5% |
| 2ibgA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.92e-01 | 95.0% | 79.4% |
| 5utkA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.97e-01 | 95.0% | 87.8% |
| 2wyrA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 39.0 | 2.96e-01 | 82.0% | 82.5% |
| 6n44A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 38.0 | 3.43e-01 | 84.0% | 57.6% |
| 5iroD00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 31.0 | 3.17e-01 | 90.0% | 60.8% |
| 3v6oA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 36.0 | 3.80e-01 | 91.0% | 85.1% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3276783 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.74 | 45.0 | 4.04e-01 | 76.0% | 45.2% |
| 3964622 | 3523.1.1.2 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptD_N | 0.70 | 54.0 | 4.72e-01 | 82.0% | 78.0% |
| 3989574 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 44.0 | 4.72e-01 | 89.0% | 76.5% |
| 4026408 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.67 | 42.0 | 4.20e-01 | 86.0% | 62.0% |
| 4293453 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 45.0 | 4.95e-01 | 93.0% | 86.3% |
| 3704305 | 4.1.1.344 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31193 | 0.66 | 45.0 | 5.19e-01 | 91.0% | 100.0% |
| 157624 | 4.1.1.47 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin6 | 0.64 | 44.0 | 4.75e-01 | 92.0% | 82.6% |
| 3971321 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.64 | 43.0 | 4.89e-01 | 90.0% | 98.6% |
| 3507639 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.64 | 42.0 | 4.84e-01 | 91.0% | 95.7% |
| 3705153 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 45.0 | 4.10e-01 | 74.0% | 76.3% |
| 5031433 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 43.0 | 4.32e-01 | 70.0% | 79.0% |
| 3537565 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 39.0 | 4.29e-01 | 76.0% | 78.8% |
| 3723694 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 42.0 | 3.67e-01 | 70.0% | 68.0% |
| 5051533 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 42.0 | 4.08e-01 | 70.0% | 75.5% |
| 3393055 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 42.0 | 3.94e-01 | 80.0% | 60.0% |
| 4041376 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.59 | 41.0 | 4.44e-01 | 95.0% | 90.0% |
| 3991097 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 44.0 | 4.08e-01 | 82.0% | 63.2% |
| 3709848 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 34.0 | 3.89e-01 | 83.0% | 84.6% |
| 3512614 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.57 | 39.0 | 3.72e-01 | 92.0% | 60.9% |
| 3418985 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.57 | 46.0 | 3.76e-01 | 89.0% | 70.8% |
| 4377781 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.56 | 40.0 | 4.38e-01 | 88.0% | 93.8% |
| 3603658 | 4004.1.1.3 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C | 0.55 | 47.0 | 4.06e-01 | 94.0% | 80.0% |
| 1098 | 10.1.1.29 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Exotox-A_bind | 0.55 | 44.0 | 3.34e-01 | 86.0% | 62.7% |
| 3252112 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 39.0 | 3.66e-01 | 72.0% | 71.7% |
| 3294481 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.55 | 49.0 | 3.44e-01 | 100.0% | 83.9% |
| 3564421 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 37.0 | 3.58e-01 | 76.0% | 60.0% |
| 3857490 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.55 | 38.0 | 3.56e-01 | 78.0% | 57.6% |
| 3819113 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.54 | 48.0 | 3.46e-01 | 100.0% | 79.0% |
| 3892517 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 37.0 | 3.32e-01 | 70.0% | 69.6% |
| 3180245 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.53 | 47.0 | 3.94e-01 | 97.0% | 82.9% |
| 3520837 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 41.0 | 3.74e-01 | 82.0% | 79.3% |
| 3739007 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 38.0 | 3.39e-01 | 73.0% | 72.1% |
| 3902892 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.53 | 41.0 | 3.32e-01 | 82.0% | 70.5% |
| 4179803 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.53 | 30.0 | 2.48e-01 | 86.0% | 27.0% |
| 3986591 | 10.1.1.61 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF6645 | 0.52 | 44.0 | 3.48e-01 | 94.0% | 89.1% |
| 3923143 | 633.23.1.17 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › DuoxA | 0.52 | 36.0 | 2.74e-01 | 72.0% | 63.3% |
| 4109046 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.52 | 40.0 | 4.28e-01 | 91.0% | 97.6% |
| 4024730 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.52 | 41.0 | 4.48e-01 | 92.0% | 100.0% |
| 4241521 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.51 | 43.0 | 3.06e-01 | 92.0% | 76.8% |
| 3532406 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.51 | 41.0 | 3.46e-01 | 90.0% | 72.8% |
| 3343522 | 3304.1.1.2 ↗ | a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N | 0.51 | 38.0 | 3.37e-01 | 82.0% | 54.5% |
| 3027166 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 39.0 | 4.05e-01 | 87.0% | 88.0% |
| 3401352 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 38.0 | 3.56e-01 | 79.0% | 65.0% |
| 3899365 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.50 | 37.0 | 3.55e-01 | 95.0% | 65.0% |
| 3936915 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.50 | 40.0 | 3.64e-01 | 96.0% | 64.6% |