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IMGVR_UViG_3300026877_000062-3300026877-Ga0208314_1003653
Arc-VirIMGVR_UViG_3300026877_000062-3300026877-Ga0208314_1003653
Identity
- Kingdom:
- archaea
Quality
67.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-56
D2
medium
residues 57-92_158-194
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xdnA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.65 | 53.0 | 4.22e-01 | 91.8% | 98.7% |
| 6a97C01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.63 | 51.0 | 4.24e-01 | 90.4% | 69.5% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 43.0 | 3.89e-01 | 74.0% | 97.9% |
| 2k31A00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.59 | 48.0 | 3.90e-01 | 93.2% | 88.6% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 4.09e-01 | 91.8% | 62.7% |
| 4ecnA01 | 2.60.40.3540 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 | 0.56 | 46.0 | 4.09e-01 | 89.0% | 83.5% |
| 1n26A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 47.0 | 4.10e-01 | 93.2% | 90.7% |
| 4il7A00 | 2.60.120.1300 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 35.0 | 3.31e-01 | 89.0% | 55.3% |
| 4icwA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 46.0 | 3.78e-01 | 94.5% | 73.1% |
| 2b5iB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 3.97e-01 | 87.7% | 71.3% |
| 3b8fB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 48.0 | 3.81e-01 | 98.6% | 64.8% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 3.83e-01 | 94.5% | 64.6% |
| 2ia1A01 | 3.30.500.20 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › BH3703-like domains | 0.53 | 45.0 | 3.82e-01 | 94.5% | 77.3% |
| 4eq3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 3.73e-01 | 94.5% | 61.1% |
| 1cfbA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.80e-01 | 95.9% | 93.4% |
| 4g1lA01 | 2.70.20.50 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, N-terminal domain | 0.50 | 39.0 | 3.08e-01 | 86.3% | 42.3% |
| 3kf3A02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.50 | 43.0 | 3.35e-01 | 100.0% | 75.1% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5058364 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.66 | 53.0 | 3.86e-01 | 89.0% | 44.7% |
| 3443190 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.60 | 41.0 | 3.03e-01 | 74.0% | 96.7% |
| 4007507 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.59 | 48.0 | 3.55e-01 | 90.4% | 62.6% |
| 3284762 | 4090.1.1.0 ↗ | a+b two layers › BH3703-like › BH3703-like › BH3703-like | 0.58 | 50.0 | 4.05e-01 | 97.3% | 59.3% |
| 3885658 | 11.1.1.126 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL4Ra_N | 0.58 | 46.0 | 4.18e-01 | 87.7% | 64.2% |
| 3921912 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 46.0 | 4.18e-01 | 90.4% | 65.3% |
| None | — | 0.57 | 44.0 | 4.14e-01 | 90.4% | 66.7% | |
| 3279119 | 4090.1.1.0 ↗ | a+b two layers › BH3703-like › BH3703-like › BH3703-like | 0.57 | 48.0 | 4.02e-01 | 95.9% | 60.0% |
| 2387824 | 3943.1.1.0 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains | 0.57 | 45.0 | 4.05e-01 | 87.7% | 72.4% |
| 2994234 | 4090.1.1.1 ↗ | a+b two layers › BH3703-like › BH3703-like › BH3703-like › YezG-like | 0.57 | 49.0 | 3.78e-01 | 95.9% | 57.1% |
| 4195041 | 4090.1.1.1 ↗ | a+b two layers › BH3703-like › BH3703-like › BH3703-like › YezG-like | 0.56 | 48.0 | 3.81e-01 | 95.9% | 65.3% |
| 4943530 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 46.0 | 3.52e-01 | 93.2% | 72.0% |
| 135631 | 4090.1.1.1 ↗ | a+b two layers › BH3703-like › BH3703-like › BH3703-like › YezG-like | 0.54 | 47.0 | 3.67e-01 | 98.6% | 90.3% |
| 3555135 | 11.1.1.126 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL4Ra_N | 0.54 | 43.0 | 3.72e-01 | 94.5% | 56.4% |
| 224981 | 11.1.1.129 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind | 0.54 | 43.0 | 3.76e-01 | 90.4% | 58.9% |
| 3609926 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.53 | 38.0 | 3.16e-01 | 75.3% | 80.8% |
| 5029261 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.52 | 42.0 | 3.34e-01 | 87.7% | 49.3% |
| 3170100 | 884.1.1.1 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C | 0.52 | 39.0 | 3.39e-01 | 89.0% | 51.8% |
| 5059004 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 43.0 | 3.70e-01 | 91.8% | 81.7% |
| 4467867 | 3784.1.1.0 ↗ | a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related | 0.51 | 44.0 | 3.51e-01 | 94.5% | 75.9% |
| 3732786 | 219.1.1.93 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 | 0.51 | 38.0 | 3.30e-01 | 83.6% | 100.0% |
| 3962625 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.51 | 42.0 | 3.95e-01 | 95.9% | 75.6% |
| 3964220 | 2.2.1.0 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins | 0.51 | 39.0 | 3.77e-01 | 89.0% | 85.6% |
| 5076916 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.50 | 38.0 | 3.21e-01 | 83.6% | 97.8% |
| 4634055 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.50 | 43.0 | 3.22e-01 | 95.9% | 87.4% |
| 5038654 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 3.97e-01 | 87.7% | 92.5% |
| 3225736 | 219.1.1.25 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT | 0.50 | 41.0 | 3.31e-01 | 93.2% | 85.3% |
D3
medium
residues 93-157